Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MT-ND1P03886 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.92□□□□□ -0.02
MT-ND1P03886 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.92□□□□□ -0.02
MT-ND1P03886 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MT-ND1P03886 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.92□□□□□ -0.02
MT-ND1P03886 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
MT-ND1P03886 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
MT-ND1P03886 AJ011931.1-201ENST00000618749 2492 ntBASIC14.92□□□□□ -0.02
MT-ND1P03886 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.92□□□□□ -0.02
MT-ND1P03886 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MT-ND1P03886 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
MT-ND1P03886 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MT-ND1P03886 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
MT-ND1P03886 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MT-ND1P03886 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MT-ND1P03886 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MT-ND1P03886 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MT-ND1P03886 AL589702.1-201ENST00000641229 1509 ntBASIC14.92□□□□□ -0.02
MT-ND1P03886 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.92□□□□□ -0.02
MT-ND1P03886 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
MT-ND1P03886 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MT-ND1P03886 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MT-ND1P03886 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.91□□□□□ -0.02
MT-ND1P03886 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MT-ND1P03886 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MT-ND1P03886 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MT-ND1P03886 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MT-ND1P03886 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
MT-ND1P03886 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MT-ND1P03886 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MT-ND1P03886 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MT-ND1P03886 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MT-ND1P03886 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MT-ND1P03886 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MT-ND1P03886 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
MT-ND1P03886 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MT-ND1P03886 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MT-ND1P03886 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.91□□□□□ -0.02
MT-ND1P03886 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MT-ND1P03886 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
MT-ND1P03886 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
MT-ND1P03886 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.91□□□□□ -0.02
MT-ND1P03886 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MT-ND1P03886 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.91□□□□□ -0.02
MT-ND1P03886 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MT-ND1P03886 MRPL3P1-201ENST00000400109 1033 ntBASIC14.91□□□□□ -0.02
MT-ND1P03886 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.91□□□□□ -0.02
MT-ND1P03886 HCG4B-203ENST00000450128 991 ntBASIC14.91□□□□□ -0.02
MT-ND1P03886 RNA5SP419-201ENST00000515908 135 ntBASIC14.91□□□□□ -0.02
MT-ND1P03886 RNA5SP415-201ENST00000517246 115 ntBASIC14.91□□□□□ -0.02
MT-ND1P03886 IGHV3-22-201ENST00000520721 359 ntBASIC14.91□□□□□ -0.02
MT-ND1P03886 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.91□□□□□ -0.02
MT-ND1P03886 AC096734.2-201ENST00000562054 433 ntBASIC14.91□□□□□ -0.02
MT-ND1P03886 MIR4321-201ENST00000592276 80 ntBASIC14.91□□□□□ -0.02
MT-ND1P03886 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
MT-ND1P03886 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.91□□□□□ -0.02
MT-ND1P03886 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.91□□□□□ -0.02
MT-ND1P03886 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MT-ND1P03886 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MT-ND1P03886 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.91□□□□□ -0.02
MT-ND1P03886 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MT-ND1P03886 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.91□□□□□ -0.02
MT-ND1P03886 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.91□□□□□ -0.02
MT-ND1P03886 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.91□□□□□ -0.02
MT-ND1P03886 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MT-ND1P03886 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MT-ND1P03886 INTS4P1-203ENST00000641008 3683 ntBASIC14.91□□□□□ -0.02
MT-ND1P03886 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.91□□□□□ -0.02
MT-ND1P03886 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.91□□□□□ -0.02
MT-ND1P03886 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MT-ND1P03886 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.91□□□□□ -0.02
MT-ND1P03886 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MT-ND1P03886 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.91□□□□□ -0.02
MT-ND1P03886 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
MT-ND1P03886 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MT-ND1P03886 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.9□□□□□ -0.02
MT-ND1P03886 AC148477.4-201ENST00000613430 1793 ntBASIC14.9□□□□□ -0.02
MT-ND1P03886 AC073439.1-201ENST00000624121 1774 ntBASIC14.9□□□□□ -0.02
MT-ND1P03886 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MT-ND1P03886 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.9□□□□□ -0.02
MT-ND1P03886 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.9□□□□□ -0.02
MT-ND1P03886 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MT-ND1P03886 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
MT-ND1P03886 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
MT-ND1P03886 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MT-ND1P03886 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
MT-ND1P03886 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
MT-ND1P03886 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MT-ND1P03886 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.9□□□□□ -0.02
MT-ND1P03886 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MT-ND1P03886 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MT-ND1P03886 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MT-ND1P03886 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.9□□□□□ -0.02
MT-ND1P03886 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
MT-ND1P03886 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MT-ND1P03886 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
MT-ND1P03886 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.9□□□□□ -0.02
MT-ND1P03886 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MT-ND1P03886 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.9□□□□□ -0.02
MT-ND1P03886 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms