Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE6O95741 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE6O95741 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
CPNE6O95741 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
CPNE6O95741 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CPNE6O95741 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE6O95741 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
CPNE6O95741 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.47■□□□□ 0.07
CPNE6O95741 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE6O95741 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
CPNE6O95741 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
CPNE6O95741 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
CPNE6O95741 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE6O95741 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.47■□□□□ 0.07
CPNE6O95741 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.47■□□□□ 0.07
CPNE6O95741 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
CPNE6O95741 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE6O95741 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.47■□□□□ 0.07
CPNE6O95741 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE6O95741 GPR53P-205ENST00000457298 1084 ntBASIC15.47■□□□□ 0.07
CPNE6O95741 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.47■□□□□ 0.07
CPNE6O95741 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.47■□□□□ 0.07
CPNE6O95741 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE6O95741 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CPNE6O95741 AC023310.3-201ENST00000557027 670 ntBASIC15.47■□□□□ 0.07
CPNE6O95741 AC100756.1-201ENST00000562736 682 ntBASIC15.47■□□□□ 0.07
CPNE6O95741 WASH4P-201ENST00000564273 1246 ntBASIC15.47■□□□□ 0.07
CPNE6O95741 AC138749.3-201ENST00000567691 622 ntBASIC15.47■□□□□ 0.07
CPNE6O95741 AC092337.1-201ENST00000568699 1129 ntBASIC15.47■□□□□ 0.07
CPNE6O95741 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CPNE6O95741 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.47■□□□□ 0.07
CPNE6O95741 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CPNE6O95741 AC025048.3-201ENST00000590609 569 ntBASIC15.47■□□□□ 0.07
CPNE6O95741 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.47■□□□□ 0.07
CPNE6O95741 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE6O95741 AC116165.1-201ENST00000611806 668 ntBASIC15.47■□□□□ 0.07
CPNE6O95741 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.47■□□□□ 0.07
CPNE6O95741 AC005702.4-201ENST00000618393 416 ntBASIC15.47■□□□□ 0.07
CPNE6O95741 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CPNE6O95741 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE6O95741 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CPNE6O95741 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE6O95741 AL009178.2-201ENST00000597278 2719 ntBASIC15.47■□□□□ 0.07
CPNE6O95741 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.47■□□□□ 0.07
CPNE6O95741 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
CPNE6O95741 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CPNE6O95741 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.47■□□□□ 0.07
CPNE6O95741 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE6O95741 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CPNE6O95741 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE6O95741 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CPNE6O95741 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
CPNE6O95741 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE6O95741 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE6O95741 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CPNE6O95741 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.46■□□□□ 0.07
CPNE6O95741 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE6O95741 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE6O95741 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CPNE6O95741 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CPNE6O95741 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.46■□□□□ 0.07
CPNE6O95741 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE6O95741 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE6O95741 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE6O95741 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.46■□□□□ 0.07
CPNE6O95741 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CPNE6O95741 PPT1-215ENST00000641471 2368 ntBASIC15.46■□□□□ 0.07
CPNE6O95741 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE6O95741 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
CPNE6O95741 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.46■□□□□ 0.07
CPNE6O95741 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE6O95741 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE6O95741 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.46■□□□□ 0.07
CPNE6O95741 U91328.1-201ENST00000437528 223 ntBASIC15.46■□□□□ 0.07
CPNE6O95741 MYCLP2-201ENST00000449268 967 ntBASIC15.46■□□□□ 0.07
CPNE6O95741 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.46■□□□□ 0.07
CPNE6O95741 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE6O95741 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.46■□□□□ 0.07
CPNE6O95741 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
CPNE6O95741 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.46■□□□□ 0.07
CPNE6O95741 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.46■□□□□ 0.07
CPNE6O95741 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.07
CPNE6O95741 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.46■□□□□ 0.07
CPNE6O95741 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
CPNE6O95741 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE6O95741 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.46■□□□□ 0.07
CPNE6O95741 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.46■□□□□ 0.07
CPNE6O95741 IGHV3-72-202ENST00000621503 303 ntBASIC15.46■□□□□ 0.07
CPNE6O95741 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CPNE6O95741 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE6O95741 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE6O95741 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE6O95741 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE6O95741 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.46■□□□□ 0.06
CPNE6O95741 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.46■□□□□ 0.06
CPNE6O95741 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.46■□□□□ 0.06
CPNE6O95741 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
CPNE6O95741 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CPNE6O95741 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CPNE6O95741 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms