Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT4O95628 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
CNOT4O95628 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT4O95628 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.05□□□□□ -0.16
CNOT4O95628 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT4O95628 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT4O95628 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.05□□□□□ -0.16
CNOT4O95628 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.05□□□□□ -0.16
CNOT4O95628 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.05□□□□□ -0.16
CNOT4O95628 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.05□□□□□ -0.16
CNOT4O95628 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT4O95628 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.04□□□□□ -0.16
CNOT4O95628 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT4O95628 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT4O95628 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.04□□□□□ -0.16
CNOT4O95628 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT4O95628 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT4O95628 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT4O95628 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
CNOT4O95628 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
CNOT4O95628 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT4O95628 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT4O95628 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
CNOT4O95628 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT4O95628 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT4O95628 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT4O95628 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT4O95628 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT4O95628 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.04□□□□□ -0.16
CNOT4O95628 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT4O95628 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.04□□□□□ -0.16
CNOT4O95628 COX5BP8-201ENST00000416911 349 ntBASIC14.04□□□□□ -0.16
CNOT4O95628 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT4O95628 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.04□□□□□ -0.16
CNOT4O95628 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.04□□□□□ -0.16
CNOT4O95628 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT4O95628 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.04□□□□□ -0.16
CNOT4O95628 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT4O95628 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT4O95628 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.04□□□□□ -0.16
CNOT4O95628 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.04□□□□□ -0.16
CNOT4O95628 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.04□□□□□ -0.16
CNOT4O95628 AC135586.1-201ENST00000539323 574 ntBASIC14.04□□□□□ -0.16
CNOT4O95628 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.04□□□□□ -0.16
CNOT4O95628 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT4O95628 AC092337.1-201ENST00000568699 1129 ntBASIC14.04□□□□□ -0.16
CNOT4O95628 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.04□□□□□ -0.16
CNOT4O95628 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
CNOT4O95628 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT4O95628 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.04□□□□□ -0.16
CNOT4O95628 AL450472.2-201ENST00000603663 1156 ntBASIC14.04□□□□□ -0.16
CNOT4O95628 AC008738.7-201ENST00000609744 511 ntBASIC14.04□□□□□ -0.16
CNOT4O95628 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CNOT4O95628 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT4O95628 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT4O95628 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT4O95628 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT4O95628 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT4O95628 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT4O95628 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT4O95628 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
CNOT4O95628 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT4O95628 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CNOT4O95628 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT4O95628 AL136379.1-201ENST00000623471 2642 ntBASIC14.04□□□□□ -0.16
CNOT4O95628 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CNOT4O95628 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CNOT4O95628 REXO1L1P-202ENST00000608646 1974 ntBASIC14.03□□□□□ -0.16
CNOT4O95628 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.03□□□□□ -0.16
CNOT4O95628 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNOT4O95628 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.03□□□□□ -0.16
CNOT4O95628 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CNOT4O95628 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNOT4O95628 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNOT4O95628 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.03□□□□□ -0.16
CNOT4O95628 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNOT4O95628 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNOT4O95628 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNOT4O95628 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CNOT4O95628 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CNOT4O95628 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.03□□□□□ -0.16
CNOT4O95628 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNOT4O95628 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
CNOT4O95628 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNOT4O95628 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNOT4O95628 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CNOT4O95628 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CNOT4O95628 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.03□□□□□ -0.16
CNOT4O95628 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.03□□□□□ -0.16
CNOT4O95628 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.03□□□□□ -0.16
CNOT4O95628 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CNOT4O95628 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNOT4O95628 HLA-V-201ENST00000429037 534 ntBASIC14.03□□□□□ -0.16
CNOT4O95628 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNOT4O95628 SPTLC1P1-201ENST00000447199 261 ntBASIC14.03□□□□□ -0.16
CNOT4O95628 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.03□□□□□ -0.16
CNOT4O95628 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.03□□□□□ -0.16
CNOT4O95628 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.03□□□□□ -0.16
CNOT4O95628 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CNOT4O95628 AC044860.1-202ENST00000559481 777 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms