Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTN3O95197 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTN3O95197 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTN3O95197 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RTN3O95197 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.6■□□□□ 0.25
RTN3O95197 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.6■□□□□ 0.25
RTN3O95197 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTN3O95197 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTN3O95197 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.6■□□□□ 0.25
RTN3O95197 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.6■□□□□ 0.25
RTN3O95197 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RTN3O95197 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.6■□□□□ 0.25
RTN3O95197 AC005034.1-201ENST00000426657 489 ntBASIC16.6■□□□□ 0.25
RTN3O95197 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.6■□□□□ 0.25
RTN3O95197 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.6■□□□□ 0.25
RTN3O95197 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.6■□□□□ 0.25
RTN3O95197 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.6■□□□□ 0.25
RTN3O95197 AC123567.1-201ENST00000548294 1261 ntBASIC16.6■□□□□ 0.25
RTN3O95197 CR383656.12-201ENST00000549567 513 ntBASIC16.6■□□□□ 0.25
RTN3O95197 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.6■□□□□ 0.25
RTN3O95197 AC008494.3-201ENST00000606615 944 ntBASIC16.6■□□□□ 0.25
RTN3O95197 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.6■□□□□ 0.25
RTN3O95197 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RTN3O95197 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTN3O95197 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.6■□□□□ 0.25
RTN3O95197 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.6■□□□□ 0.25
RTN3O95197 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.6■□□□□ 0.25
RTN3O95197 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTN3O95197 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.6■□□□□ 0.25
RTN3O95197 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.6■□□□□ 0.25
RTN3O95197 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.6■□□□□ 0.25
RTN3O95197 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTN3O95197 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RTN3O95197 AL607033.1-201ENST00000623900 1599 ntBASIC16.6■□□□□ 0.25
RTN3O95197 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTN3O95197 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.59■□□□□ 0.25
RTN3O95197 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTN3O95197 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
RTN3O95197 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
RTN3O95197 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RTN3O95197 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.59■□□□□ 0.25
RTN3O95197 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.59■□□□□ 0.25
RTN3O95197 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTN3O95197 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RTN3O95197 AC144831.1-201ENST00000573312 2656 ntBASIC16.59■□□□□ 0.25
RTN3O95197 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.59■□□□□ 0.25
RTN3O95197 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.59■□□□□ 0.25
RTN3O95197 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.59■□□□□ 0.25
RTN3O95197 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.59■□□□□ 0.25
RTN3O95197 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTN3O95197 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTN3O95197 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTN3O95197 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.59■□□□□ 0.25
RTN3O95197 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RTN3O95197 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
RTN3O95197 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RTN3O95197 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RTN3O95197 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTN3O95197 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTN3O95197 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RTN3O95197 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTN3O95197 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
RTN3O95197 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.59■□□□□ 0.25
RTN3O95197 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RTN3O95197 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RTN3O95197 MYCLP2-201ENST00000449268 967 ntBASIC16.59■□□□□ 0.25
RTN3O95197 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.59■□□□□ 0.25
RTN3O95197 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.59■□□□□ 0.25
RTN3O95197 AC104596.2-201ENST00000512793 793 ntBASIC16.59■□□□□ 0.25
RTN3O95197 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.59■□□□□ 0.25
RTN3O95197 AC036164.1-201ENST00000570544 333 ntBASIC16.59■□□□□ 0.25
RTN3O95197 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.59■□□□□ 0.25
RTN3O95197 AL035252.4-201ENST00000624174 288 ntBASIC16.59■□□□□ 0.25
RTN3O95197 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
RTN3O95197 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RTN3O95197 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTN3O95197 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.59■□□□□ 0.25
RTN3O95197 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTN3O95197 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTN3O95197 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTN3O95197 CU639417.3-201ENST00000624240 1404 ntBASIC16.59■□□□□ 0.25
RTN3O95197 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
RTN3O95197 AC138969.3-201ENST00000546612 1459 ntBASIC16.59■□□□□ 0.25
RTN3O95197 AC138932.2-201ENST00000548268 1459 ntBASIC16.59■□□□□ 0.25
RTN3O95197 AC126755.4-201ENST00000549796 1459 ntBASIC16.59■□□□□ 0.25
RTN3O95197 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTN3O95197 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTN3O95197 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTN3O95197 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.59■□□□□ 0.25
RTN3O95197 CDC14C-201ENST00000428251 1719 ntBASIC16.59■□□□□ 0.25
RTN3O95197 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.59■□□□□ 0.25
RTN3O95197 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.59■□□□□ 0.25
RTN3O95197 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.59■□□□□ 0.25
RTN3O95197 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.59■□□□□ 0.25
RTN3O95197 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.59■□□□□ 0.25
RTN3O95197 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.59■□□□□ 0.25
RTN3O95197 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
RTN3O95197 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
RTN3O95197 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RTN3O95197 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms