Protein–RNA interactions for Protein: O60784

TOM1, Target of Myb protein 1, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1O60784 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TOM1O60784 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TOM1O60784 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TOM1O60784 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TOM1O60784 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TOM1O60784 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TOM1O60784 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TOM1O60784 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TOM1O60784 GCK-202ENST00000345378 2421 ntTSL 2 BASIC20.96■□□□□ 0.95
TOM1O60784 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC20.96■□□□□ 0.95
TOM1O60784 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC20.96■□□□□ 0.95
TOM1O60784 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TOM1O60784 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TOM1O60784 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TOM1O60784 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TOM1O60784 RBM38-204ENST00000371219 760 ntTSL 2 BASIC20.96■□□□□ 0.95
TOM1O60784 AC093909.3-201ENST00000504783 336 ntBASIC20.96■□□□□ 0.95
TOM1O60784 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC20.96■□□□□ 0.95
TOM1O60784 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC20.96■□□□□ 0.95
TOM1O60784 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC20.96■□□□□ 0.95
TOM1O60784 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC20.96■□□□□ 0.95
TOM1O60784 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC20.96■□□□□ 0.95
TOM1O60784 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TOM1O60784 RNF165-205ENST00000588679 2904 ntBASIC20.96■□□□□ 0.95
TOM1O60784 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TOM1O60784 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TOM1O60784 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TOM1O60784 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TOM1O60784 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TOM1O60784 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TOM1O60784 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TOM1O60784 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TOM1O60784 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TOM1O60784 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TOM1O60784 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TOM1O60784 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TOM1O60784 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TOM1O60784 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TOM1O60784 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TOM1O60784 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TOM1O60784 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
TOM1O60784 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
TOM1O60784 CTSL-202ENST00000342020 933 ntTSL 2 BASIC20.95■□□□□ 0.94
TOM1O60784 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TOM1O60784 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TOM1O60784 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC20.95■□□□□ 0.94
TOM1O60784 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC20.95■□□□□ 0.94
TOM1O60784 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TOM1O60784 HLA-DPA2-205ENST00000433582 733 ntBASIC20.95■□□□□ 0.94
TOM1O60784 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC20.95■□□□□ 0.94
TOM1O60784 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC20.95■□□□□ 0.94
TOM1O60784 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC20.95■□□□□ 0.94
TOM1O60784 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TOM1O60784 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC20.95■□□□□ 0.94
TOM1O60784 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC20.95■□□□□ 0.94
TOM1O60784 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TOM1O60784 AC011471.3-201ENST00000623576 402 ntBASIC20.95■□□□□ 0.94
TOM1O60784 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TOM1O60784 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.95■□□□□ 0.94
TOM1O60784 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TOM1O60784 AMT-233ENST00000636522 1620 ntTSL 2 BASIC20.95■□□□□ 0.94
TOM1O60784 AC067852.2-201ENST00000590513 2313 ntBASIC20.95■□□□□ 0.94
TOM1O60784 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
TOM1O60784 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC20.95■□□□□ 0.94
TOM1O60784 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TOM1O60784 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TOM1O60784 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TOM1O60784 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC20.94■□□□□ 0.94
TOM1O60784 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC20.94■□□□□ 0.94
TOM1O60784 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
TOM1O60784 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TOM1O60784 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TOM1O60784 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TOM1O60784 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TOM1O60784 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TOM1O60784 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC20.94■□□□□ 0.94
TOM1O60784 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC20.94■□□□□ 0.94
TOM1O60784 ORAOV1P1-201ENST00000503108 395 ntBASIC20.94■□□□□ 0.94
TOM1O60784 MRPL22P1-201ENST00000505398 616 ntBASIC20.94■□□□□ 0.94
TOM1O60784 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC20.94■□□□□ 0.94
TOM1O60784 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
TOM1O60784 MIR5001-201ENST00000580185 100 ntBASIC20.94■□□□□ 0.94
TOM1O60784 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC20.94■□□□□ 0.94
TOM1O60784 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC20.94■□□□□ 0.94
TOM1O60784 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
TOM1O60784 HMGB1P24-201ENST00000611897 328 ntBASIC20.94■□□□□ 0.94
TOM1O60784 AL157813.1-201ENST00000612996 587 ntBASIC20.94■□□□□ 0.94
TOM1O60784 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TOM1O60784 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TOM1O60784 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TOM1O60784 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TOM1O60784 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TOM1O60784 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TOM1O60784 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TOM1O60784 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.94■□□□□ 0.94
TOM1O60784 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TOM1O60784 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TOM1O60784 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TOM1O60784 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TOM1O60784 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms