Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTNND1O60716 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CTNND1O60716 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC18.26■□□□□ 0.51
CTNND1O60716 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CTNND1O60716 MIR1247-201ENST00000408206 136 ntBASIC18.26■□□□□ 0.51
CTNND1O60716 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.26■□□□□ 0.51
CTNND1O60716 GPAA1P2-201ENST00000417923 928 ntBASIC18.26■□□□□ 0.51
CTNND1O60716 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CTNND1O60716 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CTNND1O60716 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.26■□□□□ 0.51
CTNND1O60716 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CTNND1O60716 AC078819.1-201ENST00000547454 765 ntBASIC18.26■□□□□ 0.51
CTNND1O60716 AC012085.1-201ENST00000548270 765 ntBASIC18.26■□□□□ 0.51
CTNND1O60716 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC18.26■□□□□ 0.51
CTNND1O60716 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC18.26■□□□□ 0.51
CTNND1O60716 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.26■□□□□ 0.51
CTNND1O60716 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.26■□□□□ 0.51
CTNND1O60716 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTNND1O60716 BX539320.1-201ENST00000623759 877 ntBASIC18.26■□□□□ 0.51
CTNND1O60716 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
CTNND1O60716 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CTNND1O60716 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.26■□□□□ 0.51
CTNND1O60716 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CTNND1O60716 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTNND1O60716 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.26■□□□□ 0.51
CTNND1O60716 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTNND1O60716 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CTNND1O60716 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTNND1O60716 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CTNND1O60716 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTNND1O60716 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTNND1O60716 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CTNND1O60716 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTNND1O60716 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTNND1O60716 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTNND1O60716 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTNND1O60716 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CTNND1O60716 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC18.25■□□□□ 0.51
CTNND1O60716 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.25■□□□□ 0.51
CTNND1O60716 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.25■□□□□ 0.51
CTNND1O60716 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CTNND1O60716 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.25■□□□□ 0.51
CTNND1O60716 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.25■□□□□ 0.51
CTNND1O60716 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTNND1O60716 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTNND1O60716 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTNND1O60716 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CTNND1O60716 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CTNND1O60716 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC18.25■□□□□ 0.51
CTNND1O60716 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC18.25■□□□□ 0.51
CTNND1O60716 FAM86HP-204ENST00000513466 959 ntBASIC18.25■□□□□ 0.51
CTNND1O60716 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC18.25■□□□□ 0.51
CTNND1O60716 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC18.25■□□□□ 0.51
CTNND1O60716 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC18.25■□□□□ 0.51
CTNND1O60716 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC18.25■□□□□ 0.51
CTNND1O60716 MIR3615-201ENST00000581999 87 ntBASIC18.25■□□□□ 0.51
CTNND1O60716 AC243960.2-201ENST00000600996 747 ntBASIC18.25■□□□□ 0.51
CTNND1O60716 AC084346.2-201ENST00000607097 949 ntBASIC18.25■□□□□ 0.51
CTNND1O60716 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC18.25■□□□□ 0.51
CTNND1O60716 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC18.25■□□□□ 0.51
CTNND1O60716 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CTNND1O60716 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CTNND1O60716 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CTNND1O60716 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CTNND1O60716 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTNND1O60716 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC18.25■□□□□ 0.51
CTNND1O60716 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CTNND1O60716 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTNND1O60716 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.25■□□□□ 0.51
CTNND1O60716 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTNND1O60716 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.25■□□□□ 0.51
CTNND1O60716 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CTNND1O60716 KRT8P35-201ENST00000483942 1338 ntBASIC18.24■□□□□ 0.51
CTNND1O60716 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTNND1O60716 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC18.24■□□□□ 0.51
CTNND1O60716 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.24■□□□□ 0.51
CTNND1O60716 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTNND1O60716 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.24■□□□□ 0.51
CTNND1O60716 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTNND1O60716 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTNND1O60716 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTNND1O60716 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC18.24■□□□□ 0.51
CTNND1O60716 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CTNND1O60716 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC18.24■□□□□ 0.51
CTNND1O60716 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.24■□□□□ 0.51
CTNND1O60716 ZNF767P-206ENST00000513792 565 ntBASIC18.24■□□□□ 0.51
CTNND1O60716 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC18.24■□□□□ 0.51
CTNND1O60716 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC18.24■□□□□ 0.51
CTNND1O60716 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC18.24■□□□□ 0.51
CTNND1O60716 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC18.24■□□□□ 0.51
CTNND1O60716 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC18.24■□□□□ 0.51
CTNND1O60716 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CTNND1O60716 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC18.24■□□□□ 0.51
CTNND1O60716 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC18.24■□□□□ 0.51
CTNND1O60716 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC18.24■□□□□ 0.51
CTNND1O60716 AC138951.2-201ENST00000623455 1161 ntBASIC18.24■□□□□ 0.51
CTNND1O60716 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC18.24■□□□□ 0.51
CTNND1O60716 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTNND1O60716 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CTNND1O60716 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms