Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.04■□□□□ -0
LCMT2O60294 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.04■□□□□ -0
LCMT2O60294 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LCMT2O60294 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.04■□□□□ -0
LCMT2O60294 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.04■□□□□ -0
LCMT2O60294 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
LCMT2O60294 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LCMT2O60294 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.04■□□□□ -0
LCMT2O60294 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.04■□□□□ -0
LCMT2O60294 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LCMT2O60294 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.04■□□□□ -0
LCMT2O60294 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.04■□□□□ -0
LCMT2O60294 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
LCMT2O60294 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
LCMT2O60294 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LCMT2O60294 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.04■□□□□ -0
LCMT2O60294 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.04■□□□□ -0
LCMT2O60294 SERBP1P5-201ENST00000510079 1181 ntBASIC15.04■□□□□ -0
LCMT2O60294 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
LCMT2O60294 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.04■□□□□ -0
LCMT2O60294 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.04■□□□□ -0
LCMT2O60294 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.04■□□□□ -0
LCMT2O60294 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
LCMT2O60294 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.04■□□□□ -0
LCMT2O60294 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
LCMT2O60294 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.04■□□□□ -0
LCMT2O60294 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LCMT2O60294 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.04■□□□□ -0
LCMT2O60294 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.04■□□□□ -0
LCMT2O60294 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LCMT2O60294 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.04■□□□□ -0
LCMT2O60294 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.04■□□□□ -0
LCMT2O60294 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
LCMT2O60294 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
LCMT2O60294 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.03■□□□□ -0
LCMT2O60294 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.03■□□□□ -0
LCMT2O60294 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
LCMT2O60294 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
LCMT2O60294 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LCMT2O60294 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
LCMT2O60294 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
LCMT2O60294 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LCMT2O60294 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LCMT2O60294 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.03■□□□□ -0
LCMT2O60294 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.03■□□□□ -0
LCMT2O60294 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.03■□□□□ -0
LCMT2O60294 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LCMT2O60294 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LCMT2O60294 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LCMT2O60294 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LCMT2O60294 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LCMT2O60294 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.03■□□□□ -0
LCMT2O60294 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.03■□□□□ -0
LCMT2O60294 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.03■□□□□ -0
LCMT2O60294 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.03■□□□□ -0
LCMT2O60294 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.03■□□□□ -0
LCMT2O60294 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
LCMT2O60294 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.03■□□□□ -0
LCMT2O60294 RN7SL204P-201ENST00000582831 262 ntBASIC15.03■□□□□ -0
LCMT2O60294 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.03■□□□□ -0
LCMT2O60294 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.03■□□□□ -0
LCMT2O60294 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.03■□□□□ -0
LCMT2O60294 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.03■□□□□ -0
LCMT2O60294 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
LCMT2O60294 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
LCMT2O60294 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.03■□□□□ -0
LCMT2O60294 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
LCMT2O60294 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.03■□□□□ -0
LCMT2O60294 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
LCMT2O60294 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
LCMT2O60294 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
LCMT2O60294 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.02■□□□□ -0
LCMT2O60294 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.02■□□□□ -0
LCMT2O60294 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.02■□□□□ -0
LCMT2O60294 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.02■□□□□ -0
LCMT2O60294 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.02■□□□□ -0
LCMT2O60294 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.02■□□□□ -0
LCMT2O60294 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.02■□□□□ -0
LCMT2O60294 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
LCMT2O60294 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LCMT2O60294 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
LCMT2O60294 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.02■□□□□ -0
LCMT2O60294 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
LCMT2O60294 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
LCMT2O60294 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LCMT2O60294 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.02■□□□□ -0
LCMT2O60294 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
LCMT2O60294 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.02■□□□□ -0
LCMT2O60294 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LCMT2O60294 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LCMT2O60294 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LCMT2O60294 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.02■□□□□ -0
LCMT2O60294 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.02■□□□□ -0
LCMT2O60294 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.02■□□□□ -0
LCMT2O60294 MEIS3P1-201ENST00000495167 958 ntBASIC15.02■□□□□ -0
LCMT2O60294 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.02■□□□□ -0
LCMT2O60294 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.02■□□□□ -0
LCMT2O60294 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.02■□□□□ -0
LCMT2O60294 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
LCMT2O60294 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms