Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SGCEO43556 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.01□□□□□ -0.17
SGCEO43556 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SGCEO43556 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SGCEO43556 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.01□□□□□ -0.17
SGCEO43556 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SGCEO43556 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.01□□□□□ -0.17
SGCEO43556 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SGCEO43556 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.01□□□□□ -0.17
SGCEO43556 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.01□□□□□ -0.17
SGCEO43556 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SGCEO43556 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SGCEO43556 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SGCEO43556 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SGCEO43556 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SGCEO43556 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SGCEO43556 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
SGCEO43556 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SGCEO43556 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SGCEO43556 GOLGA8DP-202ENST00000341390 2184 ntBASIC14□□□□□ -0.17
SGCEO43556 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SGCEO43556 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SGCEO43556 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SGCEO43556 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SGCEO43556 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14□□□□□ -0.17
SGCEO43556 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14□□□□□ -0.17
SGCEO43556 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SGCEO43556 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14□□□□□ -0.17
SGCEO43556 REXO1L1P-202ENST00000608646 1974 ntBASIC14□□□□□ -0.17
SGCEO43556 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SGCEO43556 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SGCEO43556 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14□□□□□ -0.17
SGCEO43556 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SGCEO43556 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SGCEO43556 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14□□□□□ -0.17
SGCEO43556 MIR1233-2-201ENST00000408138 82 ntBASIC14□□□□□ -0.17
SGCEO43556 MIR1233-1-201ENST00000408722 82 ntBASIC14□□□□□ -0.17
SGCEO43556 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14□□□□□ -0.17
SGCEO43556 GPS2P2-201ENST00000430745 888 ntBASIC14□□□□□ -0.17
SGCEO43556 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14□□□□□ -0.17
SGCEO43556 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14□□□□□ -0.17
SGCEO43556 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14□□□□□ -0.17
SGCEO43556 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14□□□□□ -0.17
SGCEO43556 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14□□□□□ -0.17
SGCEO43556 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SGCEO43556 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14□□□□□ -0.17
SGCEO43556 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14□□□□□ -0.17
SGCEO43556 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SGCEO43556 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SGCEO43556 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SGCEO43556 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14□□□□□ -0.17
SGCEO43556 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SGCEO43556 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SGCEO43556 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14□□□□□ -0.17
SGCEO43556 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SGCEO43556 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
SGCEO43556 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14□□□□□ -0.17
SGCEO43556 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SGCEO43556 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
SGCEO43556 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14□□□□□ -0.17
SGCEO43556 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SGCEO43556 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SGCEO43556 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.99□□□□□ -0.17
SGCEO43556 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SGCEO43556 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.99□□□□□ -0.17
SGCEO43556 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SGCEO43556 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SGCEO43556 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.99□□□□□ -0.17
SGCEO43556 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
SGCEO43556 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SGCEO43556 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.99□□□□□ -0.17
SGCEO43556 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SGCEO43556 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SGCEO43556 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.99□□□□□ -0.17
SGCEO43556 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.99□□□□□ -0.17
SGCEO43556 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SGCEO43556 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SGCEO43556 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SGCEO43556 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.99□□□□□ -0.17
SGCEO43556 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.99□□□□□ -0.17
SGCEO43556 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.99□□□□□ -0.17
SGCEO43556 SPDYE14P-201ENST00000442619 822 ntBASIC13.99□□□□□ -0.17
SGCEO43556 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.99□□□□□ -0.17
SGCEO43556 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.99□□□□□ -0.17
SGCEO43556 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.99□□□□□ -0.17
SGCEO43556 AC026150.2-201ENST00000564693 1156 ntBASIC13.99□□□□□ -0.17
SGCEO43556 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.99□□□□□ -0.17
SGCEO43556 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.99□□□□□ -0.17
SGCEO43556 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.99□□□□□ -0.17
SGCEO43556 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SGCEO43556 AL596442.2-201ENST00000610240 980 ntBASIC13.99□□□□□ -0.17
SGCEO43556 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.99□□□□□ -0.17
SGCEO43556 AC079781.4-201ENST00000641908 219 ntBASIC13.99□□□□□ -0.17
SGCEO43556 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
SGCEO43556 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SGCEO43556 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.99□□□□□ -0.17
SGCEO43556 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SGCEO43556 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SGCEO43556 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.99□□□□□ -0.17
SGCEO43556 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms