Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.3■□□□□ 0.2
MSI1O43347 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
MSI1O43347 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MSI1O43347 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.3■□□□□ 0.2
MSI1O43347 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.3■□□□□ 0.2
MSI1O43347 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
MSI1O43347 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MSI1O43347 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MSI1O43347 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.3■□□□□ 0.2
MSI1O43347 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MSI1O43347 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MSI1O43347 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MSI1O43347 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MSI1O43347 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.3■□□□□ 0.2
MSI1O43347 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
MSI1O43347 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MSI1O43347 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MSI1O43347 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
MSI1O43347 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
MSI1O43347 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.3■□□□□ 0.2
MSI1O43347 KRT18P43-201ENST00000469825 1281 ntBASIC16.3■□□□□ 0.2
MSI1O43347 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
MSI1O43347 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.3■□□□□ 0.2
MSI1O43347 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.3■□□□□ 0.2
MSI1O43347 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.3■□□□□ 0.2
MSI1O43347 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.3■□□□□ 0.2
MSI1O43347 AL596325.1-201ENST00000563991 1082 ntBASIC16.3■□□□□ 0.2
MSI1O43347 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MSI1O43347 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
MSI1O43347 AC012645.4-201ENST00000610691 1061 ntBASIC16.3■□□□□ 0.2
MSI1O43347 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.3■□□□□ 0.2
MSI1O43347 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.3■□□□□ 0.2
MSI1O43347 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MSI1O43347 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
MSI1O43347 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.3■□□□□ 0.2
MSI1O43347 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.3■□□□□ 0.2
MSI1O43347 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MSI1O43347 AC127383.1-201ENST00000444697 1800 ntBASIC16.3■□□□□ 0.2
MSI1O43347 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
MSI1O43347 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.3■□□□□ 0.2
MSI1O43347 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MSI1O43347 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MSI1O43347 AC022188.1-201ENST00000620960 1664 ntBASIC16.3■□□□□ 0.2
MSI1O43347 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MSI1O43347 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MSI1O43347 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.3■□□□□ 0.2
MSI1O43347 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
MSI1O43347 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MSI1O43347 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
MSI1O43347 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
MSI1O43347 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MSI1O43347 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MSI1O43347 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
MSI1O43347 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MSI1O43347 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
MSI1O43347 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MSI1O43347 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MSI1O43347 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MSI1O43347 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MSI1O43347 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MSI1O43347 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MSI1O43347 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MSI1O43347 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MSI1O43347 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
MSI1O43347 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MSI1O43347 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MSI1O43347 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MSI1O43347 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
MSI1O43347 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.29■□□□□ 0.2
MSI1O43347 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.29■□□□□ 0.2
MSI1O43347 FAM86LP-201ENST00000478302 853 ntBASIC16.29■□□□□ 0.2
MSI1O43347 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
MSI1O43347 RRP7BP-205ENST00000566851 833 ntBASIC16.29■□□□□ 0.2
MSI1O43347 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.29■□□□□ 0.2
MSI1O43347 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.29■□□□□ 0.2
MSI1O43347 AC027307.3-201ENST00000594262 1100 ntBASIC16.29■□□□□ 0.2
MSI1O43347 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.29■□□□□ 0.2
MSI1O43347 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.29■□□□□ 0.2
MSI1O43347 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MSI1O43347 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.29■□□□□ 0.2
MSI1O43347 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
MSI1O43347 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MSI1O43347 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.29■□□□□ 0.2
MSI1O43347 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
MSI1O43347 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MSI1O43347 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.29■□□□□ 0.2
MSI1O43347 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
MSI1O43347 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.29■□□□□ 0.2
MSI1O43347 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MSI1O43347 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MSI1O43347 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MSI1O43347 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MSI1O43347 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.29■□□□□ 0.2
MSI1O43347 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
MSI1O43347 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MSI1O43347 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MSI1O43347 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MSI1O43347 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.28■□□□□ 0.2
MSI1O43347 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MSI1O43347 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms