Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.88■□□□□ 0.13
TRIM38O00635 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM38O00635 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM38O00635 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM38O00635 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM38O00635 REXO1L8P-201ENST00000604378 1897 ntBASIC15.88■□□□□ 0.13
TRIM38O00635 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM38O00635 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM38O00635 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
TRIM38O00635 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM38O00635 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM38O00635 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM38O00635 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TRIM38O00635 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM38O00635 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM38O00635 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM38O00635 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TRIM38O00635 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM38O00635 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM38O00635 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM38O00635 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM38O00635 AL031731.1-201ENST00000642131 2094 ntBASIC15.87■□□□□ 0.13
TRIM38O00635 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TRIM38O00635 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM38O00635 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM38O00635 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM38O00635 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM38O00635 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM38O00635 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
TRIM38O00635 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.87■□□□□ 0.13
TRIM38O00635 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM38O00635 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.87■□□□□ 0.13
TRIM38O00635 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM38O00635 INE1-201ENST00000456273 945 ntBASIC15.87■□□□□ 0.13
TRIM38O00635 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRIM38O00635 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM38O00635 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRIM38O00635 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TRIM38O00635 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM38O00635 AC061975.2-201ENST00000581722 295 ntBASIC15.87■□□□□ 0.13
TRIM38O00635 AC024267.1-201ENST00000582320 895 ntBASIC15.87■□□□□ 0.13
TRIM38O00635 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.87■□□□□ 0.13
TRIM38O00635 AC008494.3-201ENST00000606615 944 ntBASIC15.87■□□□□ 0.13
TRIM38O00635 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM38O00635 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TRIM38O00635 IGHV3-72-202ENST00000621503 303 ntBASIC15.87■□□□□ 0.13
TRIM38O00635 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM38O00635 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM38O00635 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM38O00635 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM38O00635 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM38O00635 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
TRIM38O00635 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM38O00635 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM38O00635 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TRIM38O00635 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM38O00635 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
TRIM38O00635 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM38O00635 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM38O00635 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM38O00635 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM38O00635 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM38O00635 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRIM38O00635 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TRIM38O00635 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM38O00635 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM38O00635 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
TRIM38O00635 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM38O00635 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM38O00635 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM38O00635 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM38O00635 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM38O00635 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.86■□□□□ 0.13
TRIM38O00635 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM38O00635 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM38O00635 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM38O00635 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TRIM38O00635 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM38O00635 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM38O00635 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM38O00635 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM38O00635 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TRIM38O00635 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM38O00635 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.86■□□□□ 0.13
TRIM38O00635 AC087499.6-201ENST00000411576 835 ntBASIC15.86■□□□□ 0.13
TRIM38O00635 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TRIM38O00635 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.86■□□□□ 0.13
TRIM38O00635 POU5F1P6-201ENST00000466990 990 ntBASIC15.86■□□□□ 0.13
TRIM38O00635 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM38O00635 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM38O00635 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM38O00635 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.86■□□□□ 0.13
TRIM38O00635 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM38O00635 MIR6752-201ENST00000618442 71 ntBASIC15.86■□□□□ 0.13
TRIM38O00635 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM38O00635 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TRIM38O00635 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM38O00635 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM38O00635 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
TRIM38O00635 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms