Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.92■□□□□ 0.14
AP3B1O00203 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP3B1O00203 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.92■□□□□ 0.14
AP3B1O00203 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
AP3B1O00203 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
AP3B1O00203 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP3B1O00203 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
AP3B1O00203 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP3B1O00203 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
AP3B1O00203 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP3B1O00203 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP3B1O00203 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
AP3B1O00203 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP3B1O00203 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP3B1O00203 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP3B1O00203 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP3B1O00203 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.92■□□□□ 0.14
AP3B1O00203 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP3B1O00203 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.92■□□□□ 0.14
AP3B1O00203 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
AP3B1O00203 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
AP3B1O00203 HIST3H2BA-201ENST00000436555 524 ntBASIC15.92■□□□□ 0.14
AP3B1O00203 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP3B1O00203 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.92■□□□□ 0.14
AP3B1O00203 MTND6P24-201ENST00000440466 518 ntBASIC15.92■□□□□ 0.14
AP3B1O00203 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.92■□□□□ 0.14
AP3B1O00203 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.92■□□□□ 0.14
AP3B1O00203 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
AP3B1O00203 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.92■□□□□ 0.14
AP3B1O00203 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP3B1O00203 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP3B1O00203 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
AP3B1O00203 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.92■□□□□ 0.14
AP3B1O00203 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
AP3B1O00203 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
AP3B1O00203 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP3B1O00203 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.92■□□□□ 0.14
AP3B1O00203 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
AP3B1O00203 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.92■□□□□ 0.14
AP3B1O00203 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
AP3B1O00203 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
AP3B1O00203 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
AP3B1O00203 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP3B1O00203 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.92■□□□□ 0.14
AP3B1O00203 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.92■□□□□ 0.14
AP3B1O00203 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP3B1O00203 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
AP3B1O00203 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP3B1O00203 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
AP3B1O00203 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.91■□□□□ 0.14
AP3B1O00203 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.91■□□□□ 0.14
AP3B1O00203 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP3B1O00203 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
AP3B1O00203 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP3B1O00203 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
AP3B1O00203 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
AP3B1O00203 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP3B1O00203 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP3B1O00203 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
AP3B1O00203 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP3B1O00203 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
AP3B1O00203 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP3B1O00203 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
AP3B1O00203 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP3B1O00203 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP3B1O00203 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP3B1O00203 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
AP3B1O00203 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP3B1O00203 AP006288.1-201ENST00000446065 395 ntBASIC15.91■□□□□ 0.14
AP3B1O00203 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP3B1O00203 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.91■□□□□ 0.14
AP3B1O00203 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.91■□□□□ 0.14
AP3B1O00203 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.91■□□□□ 0.14
AP3B1O00203 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.91■□□□□ 0.14
AP3B1O00203 AL079307.3-201ENST00000556114 283 ntBASIC15.91■□□□□ 0.14
AP3B1O00203 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
AP3B1O00203 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
AP3B1O00203 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
AP3B1O00203 MIR6080-201ENST00000617359 66 ntBASIC15.91■□□□□ 0.14
AP3B1O00203 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP3B1O00203 CETN4P-206ENST00000642099 2168 ntBASIC15.91■□□□□ 0.14
AP3B1O00203 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
AP3B1O00203 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
AP3B1O00203 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP3B1O00203 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
AP3B1O00203 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP3B1O00203 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.91■□□□□ 0.14
AP3B1O00203 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
AP3B1O00203 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
AP3B1O00203 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.91■□□□□ 0.14
AP3B1O00203 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.91■□□□□ 0.14
AP3B1O00203 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP3B1O00203 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
AP3B1O00203 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP3B1O00203 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3B1O00203 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3B1O00203 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
AP3B1O00203 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3B1O00203 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3B1O00203 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms