Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.78■□□□□ 0.12
CFAP99D6REC4 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
CFAP99D6REC4 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.78■□□□□ 0.12
CFAP99D6REC4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.78■□□□□ 0.12
CFAP99D6REC4 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CFAP99D6REC4 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CFAP99D6REC4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CFAP99D6REC4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CFAP99D6REC4 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CFAP99D6REC4 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.78■□□□□ 0.12
CFAP99D6REC4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.77■□□□□ 0.12
CFAP99D6REC4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CFAP99D6REC4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CFAP99D6REC4 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CFAP99D6REC4 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CFAP99D6REC4 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CFAP99D6REC4 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CFAP99D6REC4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CFAP99D6REC4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CFAP99D6REC4 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CFAP99D6REC4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CFAP99D6REC4 AC007326.2-201ENST00000624224 7579 ntBASIC15.77■□□□□ 0.12
CFAP99D6REC4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CFAP99D6REC4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
CFAP99D6REC4 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
CFAP99D6REC4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.77■□□□□ 0.12
CFAP99D6REC4 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.77■□□□□ 0.12
CFAP99D6REC4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
CFAP99D6REC4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.77■□□□□ 0.12
CFAP99D6REC4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.77■□□□□ 0.12
CFAP99D6REC4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.77■□□□□ 0.12
CFAP99D6REC4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CFAP99D6REC4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.77■□□□□ 0.12
CFAP99D6REC4 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CFAP99D6REC4 DUX4L27-201ENST00000554796 1261 ntBASIC15.77■□□□□ 0.12
CFAP99D6REC4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.77■□□□□ 0.12
CFAP99D6REC4 ADAM3B-201ENST00000569937 840 ntBASIC15.77■□□□□ 0.12
CFAP99D6REC4 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.77■□□□□ 0.12
CFAP99D6REC4 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CFAP99D6REC4 TEX28P1-201ENST00000613479 1221 ntBASIC15.77■□□□□ 0.12
CFAP99D6REC4 TEX28P2-201ENST00000617764 1221 ntBASIC15.77■□□□□ 0.12
CFAP99D6REC4 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CFAP99D6REC4 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CFAP99D6REC4 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.77■□□□□ 0.11
CFAP99D6REC4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CFAP99D6REC4 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CFAP99D6REC4 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.77■□□□□ 0.11
CFAP99D6REC4 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CFAP99D6REC4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CFAP99D6REC4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CFAP99D6REC4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.77■□□□□ 0.11
CFAP99D6REC4 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
CFAP99D6REC4 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CFAP99D6REC4 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CFAP99D6REC4 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.77■□□□□ 0.11
CFAP99D6REC4 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CFAP99D6REC4 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CFAP99D6REC4 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CFAP99D6REC4 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CFAP99D6REC4 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CFAP99D6REC4 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CFAP99D6REC4 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CFAP99D6REC4 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CFAP99D6REC4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.76■□□□□ 0.11
CFAP99D6REC4 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.76■□□□□ 0.11
CFAP99D6REC4 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.76■□□□□ 0.11
CFAP99D6REC4 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CFAP99D6REC4 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CFAP99D6REC4 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CFAP99D6REC4 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CFAP99D6REC4 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CFAP99D6REC4 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.76■□□□□ 0.11
CFAP99D6REC4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CFAP99D6REC4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CFAP99D6REC4 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CFAP99D6REC4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.76■□□□□ 0.11
CFAP99D6REC4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.76■□□□□ 0.11
CFAP99D6REC4 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CFAP99D6REC4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.76■□□□□ 0.11
CFAP99D6REC4 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.76■□□□□ 0.11
CFAP99D6REC4 AC097493.3-201ENST00000509725 367 ntBASIC15.76■□□□□ 0.11
CFAP99D6REC4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CFAP99D6REC4 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC15.76■□□□□ 0.11
CFAP99D6REC4 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CFAP99D6REC4 AL033527.5-202ENST00000641632 1098 ntBASIC15.76■□□□□ 0.11
CFAP99D6REC4 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
CFAP99D6REC4 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CFAP99D6REC4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CFAP99D6REC4 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
CFAP99D6REC4 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.76■□□□□ 0.11
CFAP99D6REC4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CFAP99D6REC4 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.76■□□□□ 0.11
CFAP99D6REC4 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CFAP99D6REC4 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
CFAP99D6REC4 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.76■□□□□ 0.11
CFAP99D6REC4 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CFAP99D6REC4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CFAP99D6REC4 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CFAP99D6REC4 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CFAP99D6REC4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms