Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MBD3L3A6NE82 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 REXO1L6P-201ENST00000603433 1515 ntBASIC13.69□□□□□ -0.22
MBD3L3A6NE82 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 AC127383.1-201ENST00000444697 1800 ntBASIC13.69□□□□□ -0.22
MBD3L3A6NE82 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 AL645937.2-201ENST00000396808 931 ntBASIC13.69□□□□□ -0.22
MBD3L3A6NE82 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 YBX1P6-201ENST00000442962 1002 ntBASIC13.69□□□□□ -0.22
MBD3L3A6NE82 AL355994.2-201ENST00000447882 704 ntBASIC13.69□□□□□ -0.22
MBD3L3A6NE82 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 AC145423.3-201ENST00000615987 467 ntBASIC13.69□□□□□ -0.22
MBD3L3A6NE82 AC008687.7-202ENST00000637404 953 ntBASIC13.69□□□□□ -0.22
MBD3L3A6NE82 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MBD3L3A6NE82 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 RNU1-114P-201ENST00000365297 166 ntBASIC13.68□□□□□ -0.22
MBD3L3A6NE82 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 KLF2P2-201ENST00000416807 1039 ntBASIC13.68□□□□□ -0.22
MBD3L3A6NE82 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 AC004066.1-201ENST00000502488 802 ntBASIC13.68□□□□□ -0.22
MBD3L3A6NE82 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.68□□□□□ -0.22
MBD3L3A6NE82 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms