Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSNK1G3Q9Y6M4 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 AC132872.4-202ENST00000622924 2756 ntBASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 MIR648-201ENST00000385046 94 ntBASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 AC005229.1-201ENST00000392885 409 ntBASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 SNX29P1-201ENST00000548357 1007 ntBASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 AC120045.2-201ENST00000567334 178 ntBASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 AC009486.1-201ENST00000569860 813 ntBASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 AL049840.4-201ENST00000602422 811 ntBASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 AC097359.3-201ENST00000603982 1210 ntBASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CSNK1G3Q9Y6M4 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 C1QBPP1-201ENST00000400117 770 ntBASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 KRT18P43-201ENST00000469825 1281 ntBASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.38■□□□□ 0.05
CSNK1G3Q9Y6M4 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms