Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 AGGF1P2-201ENST00000426656 2106 ntBASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 B9D1-203ENST00000395615 805 ntTSL 3 BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 AL354877.1-201ENST00000424412 413 ntBASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 NOC2LP1-201ENST00000450578 752 ntBASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 AC013355.1-201ENST00000562625 723 ntBASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 AL353770.1-201ENST00000614915 403 ntBASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 HTR7P1-202ENST00000624664 4411 ntBASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
ZC3H4Q9UPT8 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.83■□□□□ 0.61
ZC3H4Q9UPT8 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ZC3H4Q9UPT8 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZC3H4Q9UPT8 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ZC3H4Q9UPT8 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZC3H4Q9UPT8 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZC3H4Q9UPT8 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
ZC3H4Q9UPT8 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZC3H4Q9UPT8 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZC3H4Q9UPT8 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.83■□□□□ 0.61
ZC3H4Q9UPT8 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.83■□□□□ 0.61
ZC3H4Q9UPT8 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZC3H4Q9UPT8 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZC3H4Q9UPT8 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZC3H4Q9UPT8 AC026316.1-201ENST00000398900 414 ntBASIC18.83■□□□□ 0.61
ZC3H4Q9UPT8 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ZC3H4Q9UPT8 KLF2P2-201ENST00000416807 1039 ntBASIC18.83■□□□□ 0.61
ZC3H4Q9UPT8 RN7SL181P-201ENST00000462921 277 ntBASIC18.83■□□□□ 0.61
ZC3H4Q9UPT8 AC106794.1-201ENST00000506935 792 ntBASIC18.83■□□□□ 0.61
ZC3H4Q9UPT8 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ZC3H4Q9UPT8 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC18.83■□□□□ 0.61
ZC3H4Q9UPT8 ZACNP1-201ENST00000612259 710 ntBASIC18.83■□□□□ 0.61
ZC3H4Q9UPT8 AF254983.2-201ENST00000612331 135 ntBASIC18.83■□□□□ 0.61
ZC3H4Q9UPT8 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.83■□□□□ 0.6
ZC3H4Q9UPT8 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ZC3H4Q9UPT8 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZC3H4Q9UPT8 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
ZC3H4Q9UPT8 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZC3H4Q9UPT8 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZC3H4Q9UPT8 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.83■□□□□ 0.6
ZC3H4Q9UPT8 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZC3H4Q9UPT8 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZC3H4Q9UPT8 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZC3H4Q9UPT8 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.83■□□□□ 0.6
ZC3H4Q9UPT8 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZC3H4Q9UPT8 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.83■□□□□ 0.6
ZC3H4Q9UPT8 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZC3H4Q9UPT8 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
ZC3H4Q9UPT8 AL391005.1-201ENST00000623953 2435 ntBASIC18.83■□□□□ 0.6
ZC3H4Q9UPT8 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
ZC3H4Q9UPT8 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
ZC3H4Q9UPT8 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ZC3H4Q9UPT8 AC105020.1-201ENST00000435356 2205 ntBASIC18.83■□□□□ 0.6
ZC3H4Q9UPT8 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZC3H4Q9UPT8 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.82■□□□□ 0.6
ZC3H4Q9UPT8 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
ZC3H4Q9UPT8 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.82■□□□□ 0.6
ZC3H4Q9UPT8 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ZC3H4Q9UPT8 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms