Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
PHF8Q9UPP1 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PHF8Q9UPP1 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PHF8Q9UPP1 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PHF8Q9UPP1 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PHF8Q9UPP1 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PHF8Q9UPP1 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC21.08■□□□□ 0.97
PHF8Q9UPP1 MPV17-204ENST00000399052 749 ntTSL 4 BASIC21.08■□□□□ 0.97
PHF8Q9UPP1 AL008707.1-201ENST00000422498 534 ntBASIC21.08■□□□□ 0.97
PHF8Q9UPP1 LDHBP1-201ENST00000455730 1119 ntBASIC21.08■□□□□ 0.97
PHF8Q9UPP1 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC21.08■□□□□ 0.97
PHF8Q9UPP1 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC21.08■□□□□ 0.97
PHF8Q9UPP1 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC21.08■□□□□ 0.97
PHF8Q9UPP1 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC21.08■□□□□ 0.97
PHF8Q9UPP1 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC21.08■□□□□ 0.97
PHF8Q9UPP1 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PHF8Q9UPP1 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
PHF8Q9UPP1 MIR3907-201ENST00000579424 151 ntBASIC21.08■□□□□ 0.97
PHF8Q9UPP1 AC022748.3-201ENST00000621828 275 ntBASIC21.08■□□□□ 0.97
PHF8Q9UPP1 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
PHF8Q9UPP1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PHF8Q9UPP1 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PHF8Q9UPP1 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC21.08■□□□□ 0.96
PHF8Q9UPP1 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC21.08■□□□□ 0.96
PHF8Q9UPP1 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PHF8Q9UPP1 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC21.07■□□□□ 0.96
PHF8Q9UPP1 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC21.07■□□□□ 0.96
PHF8Q9UPP1 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PHF8Q9UPP1 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC21.07■□□□□ 0.96
PHF8Q9UPP1 AGGF1P2-201ENST00000426656 2106 ntBASIC21.07■□□□□ 0.96
PHF8Q9UPP1 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PHF8Q9UPP1 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PHF8Q9UPP1 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PHF8Q9UPP1 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC21.07■□□□□ 0.96
PHF8Q9UPP1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
PHF8Q9UPP1 SP100-205ENST00000409824 1802 ntTSL 5 BASIC21.07■□□□□ 0.96
PHF8Q9UPP1 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC21.07■□□□□ 0.96
PHF8Q9UPP1 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PHF8Q9UPP1 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PHF8Q9UPP1 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC21.07■□□□□ 0.96
PHF8Q9UPP1 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PHF8Q9UPP1 AC106820.3-201ENST00000561653 397 ntBASIC21.07■□□□□ 0.96
PHF8Q9UPP1 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC21.07■□□□□ 0.96
PHF8Q9UPP1 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC21.07■□□□□ 0.96
PHF8Q9UPP1 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PHF8Q9UPP1 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PHF8Q9UPP1 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PHF8Q9UPP1 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PHF8Q9UPP1 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PHF8Q9UPP1 AC008132.1-202ENST00000342005 1389 ntBASIC21.07■□□□□ 0.96
PHF8Q9UPP1 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PHF8Q9UPP1 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC21.07■□□□□ 0.96
PHF8Q9UPP1 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PHF8Q9UPP1 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PHF8Q9UPP1 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
PHF8Q9UPP1 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PHF8Q9UPP1 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC21.06■□□□□ 0.96
PHF8Q9UPP1 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PHF8Q9UPP1 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PHF8Q9UPP1 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PHF8Q9UPP1 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PHF8Q9UPP1 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PHF8Q9UPP1 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
PHF8Q9UPP1 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
PHF8Q9UPP1 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
PHF8Q9UPP1 SERPINA7P1-201ENST00000443077 631 ntBASIC21.06■□□□□ 0.96
PHF8Q9UPP1 MAGEA5-201ENST00000446757 942 ntBASIC21.06■□□□□ 0.96
PHF8Q9UPP1 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC21.06■□□□□ 0.96
PHF8Q9UPP1 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PHF8Q9UPP1 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC21.06■□□□□ 0.96
PHF8Q9UPP1 AC091544.8-201ENST00000619490 361 ntBASIC21.06■□□□□ 0.96
PHF8Q9UPP1 AC079336.7-201ENST00000623428 1078 ntBASIC21.06■□□□□ 0.96
PHF8Q9UPP1 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC21.06■□□□□ 0.96
PHF8Q9UPP1 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PHF8Q9UPP1 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC21.06■□□□□ 0.96
PHF8Q9UPP1 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PHF8Q9UPP1 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PHF8Q9UPP1 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PHF8Q9UPP1 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHF8Q9UPP1 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHF8Q9UPP1 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PHF8Q9UPP1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHF8Q9UPP1 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
PHF8Q9UPP1 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHF8Q9UPP1 AC022211.2-201ENST00000585075 2527 ntBASIC21.05■□□□□ 0.96
PHF8Q9UPP1 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHF8Q9UPP1 DPM3-202ENST00000368399 517 ntBASIC21.05■□□□□ 0.96
PHF8Q9UPP1 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC21.05■□□□□ 0.96
PHF8Q9UPP1 Z97180.1-201ENST00000445173 988 ntBASIC21.05■□□□□ 0.96
PHF8Q9UPP1 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC21.05■□□□□ 0.96
PHF8Q9UPP1 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHF8Q9UPP1 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PHF8Q9UPP1 SUPT4H1P2-201ENST00000501248 353 ntBASIC21.05■□□□□ 0.96
PHF8Q9UPP1 AC005740.2-201ENST00000511085 419 ntBASIC21.05■□□□□ 0.96
PHF8Q9UPP1 FADS2-212ENST00000522639 360 ntTSL 5 BASIC21.05■□□□□ 0.96
PHF8Q9UPP1 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC21.05■□□□□ 0.96
PHF8Q9UPP1 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC21.05■□□□□ 0.96
PHF8Q9UPP1 FADS2-215ENST00000574708 385 ntTSL 3 BASIC21.05■□□□□ 0.96
PHF8Q9UPP1 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHF8Q9UPP1 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms