Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
RIMBP3Q9UFD9 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
RIMBP3Q9UFD9 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC24.06■■□□□ 1.44
RIMBP3Q9UFD9 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RIMBP3Q9UFD9 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RIMBP3Q9UFD9 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC24.06■■□□□ 1.44
RIMBP3Q9UFD9 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC24.06■■□□□ 1.44
RIMBP3Q9UFD9 RAN-210ENST00000541630 1475 ntTSL 2 BASIC24.06■■□□□ 1.44
RIMBP3Q9UFD9 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
RIMBP3Q9UFD9 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
RIMBP3Q9UFD9 ACTG1P19-201ENST00000418987 1116 ntBASIC24.06■■□□□ 1.44
RIMBP3Q9UFD9 RHOQP2-201ENST00000449922 579 ntBASIC24.06■■□□□ 1.44
RIMBP3Q9UFD9 AC093826.1-201ENST00000508655 993 ntBASIC24.06■■□□□ 1.44
RIMBP3Q9UFD9 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC24.06■■□□□ 1.44
RIMBP3Q9UFD9 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC24.06■■□□□ 1.44
RIMBP3Q9UFD9 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC24.06■■□□□ 1.44
RIMBP3Q9UFD9 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
RIMBP3Q9UFD9 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
RIMBP3Q9UFD9 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
RIMBP3Q9UFD9 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RIMBP3Q9UFD9 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC24.05■■□□□ 1.44
RIMBP3Q9UFD9 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RIMBP3Q9UFD9 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
RIMBP3Q9UFD9 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
RIMBP3Q9UFD9 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RIMBP3Q9UFD9 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
RIMBP3Q9UFD9 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC24.05■■□□□ 1.44
RIMBP3Q9UFD9 LRRFIP1P1-201ENST00000498774 2246 ntBASIC24.05■■□□□ 1.44
RIMBP3Q9UFD9 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RIMBP3Q9UFD9 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
RIMBP3Q9UFD9 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RIMBP3Q9UFD9 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RIMBP3Q9UFD9 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RIMBP3Q9UFD9 RPL35P9-201ENST00000446059 350 ntBASIC24.05■■□□□ 1.44
RIMBP3Q9UFD9 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC24.05■■□□□ 1.44
RIMBP3Q9UFD9 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC24.05■■□□□ 1.44
RIMBP3Q9UFD9 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC24.05■■□□□ 1.44
RIMBP3Q9UFD9 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC24.05■■□□□ 1.44
RIMBP3Q9UFD9 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC24.05■■□□□ 1.44
RIMBP3Q9UFD9 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RIMBP3Q9UFD9 AC098818.2-201ENST00000564925 2320 ntBASIC24.04■■□□□ 1.44
RIMBP3Q9UFD9 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RIMBP3Q9UFD9 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RIMBP3Q9UFD9 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC24.04■■□□□ 1.44
RIMBP3Q9UFD9 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
RIMBP3Q9UFD9 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RIMBP3Q9UFD9 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC24.04■■□□□ 1.44
RIMBP3Q9UFD9 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
RIMBP3Q9UFD9 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RIMBP3Q9UFD9 OR51A9P-201ENST00000422578 911 ntBASIC24.04■■□□□ 1.44
RIMBP3Q9UFD9 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC24.04■■□□□ 1.44
RIMBP3Q9UFD9 AC138701.2-201ENST00000553634 226 ntBASIC24.04■■□□□ 1.44
RIMBP3Q9UFD9 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC24.04■■□□□ 1.44
RIMBP3Q9UFD9 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
RIMBP3Q9UFD9 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
RIMBP3Q9UFD9 BICD1-207ENST00000551848 1962 ntBASIC24.04■■□□□ 1.44
RIMBP3Q9UFD9 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
RIMBP3Q9UFD9 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC24.04■■□□□ 1.44
RIMBP3Q9UFD9 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC24.04■■□□□ 1.44
RIMBP3Q9UFD9 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC24.04■■□□□ 1.44
RIMBP3Q9UFD9 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RIMBP3Q9UFD9 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RIMBP3Q9UFD9 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
RIMBP3Q9UFD9 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC24.03■■□□□ 1.44
RIMBP3Q9UFD9 KRT18P36-201ENST00000411618 1276 ntBASIC24.03■■□□□ 1.44
RIMBP3Q9UFD9 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RIMBP3Q9UFD9 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
RIMBP3Q9UFD9 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RIMBP3Q9UFD9 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC24.03■■□□□ 1.44
RIMBP3Q9UFD9 FBXO36P1-201ENST00000579006 471 ntBASIC24.03■■□□□ 1.44
RIMBP3Q9UFD9 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RIMBP3Q9UFD9 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RIMBP3Q9UFD9 INE2-201ENST00000630399 1874 ntBASIC24.03■■□□□ 1.44
RIMBP3Q9UFD9 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC24.03■■□□□ 1.44
RIMBP3Q9UFD9 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RIMBP3Q9UFD9 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RIMBP3Q9UFD9 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC24.03■■□□□ 1.44
RIMBP3Q9UFD9 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC24.03■■□□□ 1.44
RIMBP3Q9UFD9 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RIMBP3Q9UFD9 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RIMBP3Q9UFD9 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RIMBP3Q9UFD9 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC24.02■■□□□ 1.44
RIMBP3Q9UFD9 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC24.02■■□□□ 1.44
RIMBP3Q9UFD9 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC24.02■■□□□ 1.44
RIMBP3Q9UFD9 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC24.02■■□□□ 1.44
RIMBP3Q9UFD9 AC138696.2-201ENST00000607376 223 ntBASIC24.02■■□□□ 1.44
RIMBP3Q9UFD9 AC009145.4-201ENST00000625119 1294 ntBASIC24.02■■□□□ 1.44
RIMBP3Q9UFD9 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RIMBP3Q9UFD9 AC025183.3-201ENST00000623526 1482 ntBASIC24.02■■□□□ 1.44
RIMBP3Q9UFD9 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RIMBP3Q9UFD9 CYP4F23P-201ENST00000593402 1579 ntBASIC24.02■■□□□ 1.44
RIMBP3Q9UFD9 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RIMBP3Q9UFD9 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RIMBP3Q9UFD9 AC009113.1-201ENST00000570267 2443 ntBASIC24.02■■□□□ 1.44
RIMBP3Q9UFD9 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC24.02■■□□□ 1.44
RIMBP3Q9UFD9 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
RIMBP3Q9UFD9 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RIMBP3Q9UFD9 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
RIMBP3Q9UFD9 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RIMBP3Q9UFD9 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms