Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 AC073347.1-201ENST00000421633 2643 ntBASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 AL691432.1-201ENST00000596308 1422 ntBASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC6Q9UBN7 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 MST1L-201ENST00000442552 2185 ntBASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 MIR6805-201ENST00000615055 62 ntBASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 Z97205.2-201ENST00000564697 1639 ntBASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.8■□□□□ 0.44
HDAC6Q9UBN7 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.79■□□□□ 0.44
HDAC6Q9UBN7 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.79■□□□□ 0.44
HDAC6Q9UBN7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.79■□□□□ 0.44
HDAC6Q9UBN7 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
HDAC6Q9UBN7 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
HDAC6Q9UBN7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HDAC6Q9UBN7 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HDAC6Q9UBN7 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.79■□□□□ 0.44
HDAC6Q9UBN7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HDAC6Q9UBN7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.79■□□□□ 0.44
HDAC6Q9UBN7 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
HDAC6Q9UBN7 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HDAC6Q9UBN7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HDAC6Q9UBN7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HDAC6Q9UBN7 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HDAC6Q9UBN7 RPS2P32-201ENST00000439199 892 ntBASIC17.79■□□□□ 0.44
HDAC6Q9UBN7 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HDAC6Q9UBN7 AC022210.1-201ENST00000449856 793 ntBASIC17.79■□□□□ 0.44
HDAC6Q9UBN7 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.79■□□□□ 0.44
HDAC6Q9UBN7 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.79■□□□□ 0.44
HDAC6Q9UBN7 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.79■□□□□ 0.44
HDAC6Q9UBN7 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.79■□□□□ 0.44
HDAC6Q9UBN7 AL512343.1-201ENST00000605837 169 ntBASIC17.79■□□□□ 0.44
HDAC6Q9UBN7 LINC01115-203ENST00000606068 577 ntBASIC17.79■□□□□ 0.44
HDAC6Q9UBN7 AL033527.5-201ENST00000641382 801 ntBASIC17.79■□□□□ 0.44
HDAC6Q9UBN7 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
HDAC6Q9UBN7 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HDAC6Q9UBN7 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.79■□□□□ 0.44
HDAC6Q9UBN7 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HDAC6Q9UBN7 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HDAC6Q9UBN7 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HDAC6Q9UBN7 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.79■□□□□ 0.44
HDAC6Q9UBN7 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HDAC6Q9UBN7 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.79■□□□□ 0.44
HDAC6Q9UBN7 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.79■□□□□ 0.44
HDAC6Q9UBN7 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HDAC6Q9UBN7 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 AC006449.6-201ENST00000612330 2296 ntBASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.78■□□□□ 0.44
HDAC6Q9UBN7 AZGP1P1-201ENST00000411909 902 ntBASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms