Protein–RNA interactions for Protein: Q9NP91

SLC6A20, Sodium- and chloride-dependent transporter XTRP3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20Q9NP91 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
SLC6A20Q9NP91 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 TPRX2P-201ENST00000535362 881 ntBASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 AL132655.2-201ENST00000596276 594 ntBASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 AC025048.6-201ENST00000634326 1161 ntBASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC6A20Q9NP91 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A20Q9NP91 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0.01
SLC6A20Q9NP91 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SLC6A20Q9NP91 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SLC6A20Q9NP91 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms