Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
COL25A1Q9BXS0 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL25A1Q9BXS0 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.49■□□□□ 0.07
COL25A1Q9BXS0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.49■□□□□ 0.07
COL25A1Q9BXS0 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
COL25A1Q9BXS0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL25A1Q9BXS0 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL25A1Q9BXS0 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
COL25A1Q9BXS0 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
COL25A1Q9BXS0 KRT8P30-201ENST00000432100 650 ntBASIC15.49■□□□□ 0.07
COL25A1Q9BXS0 EIF3FP3-201ENST00000434851 1086 ntBASIC15.49■□□□□ 0.07
COL25A1Q9BXS0 AL356000.1-201ENST00000441073 1238 ntBASIC15.49■□□□□ 0.07
COL25A1Q9BXS0 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC15.49■□□□□ 0.07
COL25A1Q9BXS0 SLC25A15P1-201ENST00000456738 342 ntBASIC15.49■□□□□ 0.07
COL25A1Q9BXS0 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC15.49■□□□□ 0.07
COL25A1Q9BXS0 SLC25A15P3-201ENST00000505530 290 ntBASIC15.49■□□□□ 0.07
COL25A1Q9BXS0 RNA5SP417-201ENST00000516459 108 ntBASIC15.49■□□□□ 0.07
COL25A1Q9BXS0 AC068831.5-201ENST00000557387 328 ntBASIC15.49■□□□□ 0.07
COL25A1Q9BXS0 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC15.49■□□□□ 0.07
COL25A1Q9BXS0 DERL2-206ENST00000572834 589 ntTSL 3 BASIC15.49■□□□□ 0.07
COL25A1Q9BXS0 AL450472.2-201ENST00000603663 1156 ntBASIC15.49■□□□□ 0.07
COL25A1Q9BXS0 AL157813.1-201ENST00000612996 587 ntBASIC15.49■□□□□ 0.07
COL25A1Q9BXS0 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC15.49■□□□□ 0.07
COL25A1Q9BXS0 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC15.49■□□□□ 0.07
COL25A1Q9BXS0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL25A1Q9BXS0 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL25A1Q9BXS0 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL25A1Q9BXS0 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
COL25A1Q9BXS0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL25A1Q9BXS0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.49■□□□□ 0.07
COL25A1Q9BXS0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.49■□□□□ 0.07
COL25A1Q9BXS0 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
COL25A1Q9BXS0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC15.49■□□□□ 0.07
COL25A1Q9BXS0 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL25A1Q9BXS0 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
COL25A1Q9BXS0 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COL25A1Q9BXS0 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL25A1Q9BXS0 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL25A1Q9BXS0 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL25A1Q9BXS0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL25A1Q9BXS0 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC15.48■□□□□ 0.07
COL25A1Q9BXS0 MBP-201ENST00000354542 575 ntTSL 2 BASIC15.48■□□□□ 0.07
COL25A1Q9BXS0 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC15.48■□□□□ 0.07
COL25A1Q9BXS0 KRT18P46-201ENST00000435568 1279 ntBASIC15.48■□□□□ 0.07
COL25A1Q9BXS0 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC15.48■□□□□ 0.07
COL25A1Q9BXS0 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC15.48■□□□□ 0.07
COL25A1Q9BXS0 CASP3-205ENST00000517513 964 ntTSL 5 BASIC15.48■□□□□ 0.07
COL25A1Q9BXS0 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.48■□□□□ 0.07
COL25A1Q9BXS0 NAT9-219ENST00000582524 573 ntTSL 4 BASIC15.48■□□□□ 0.07
COL25A1Q9BXS0 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC15.48■□□□□ 0.07
COL25A1Q9BXS0 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC15.48■□□□□ 0.07
COL25A1Q9BXS0 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC15.48■□□□□ 0.07
COL25A1Q9BXS0 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.48■□□□□ 0.07
COL25A1Q9BXS0 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL25A1Q9BXS0 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL25A1Q9BXS0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COL25A1Q9BXS0 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
COL25A1Q9BXS0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL25A1Q9BXS0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
COL25A1Q9BXS0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.48■□□□□ 0.07
COL25A1Q9BXS0 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.48■□□□□ 0.07
COL25A1Q9BXS0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COL25A1Q9BXS0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
COL25A1Q9BXS0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COL25A1Q9BXS0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL25A1Q9BXS0 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL25A1Q9BXS0 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
COL25A1Q9BXS0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 AC138028.4-201ENST00000564984 1845 ntBASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 AC012508.2-201ENST00000567613 1472 ntBASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 AC120498.9-201ENST00000339021 3867 ntBASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 AL451000.1-201ENST00000451300 1186 ntBASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 RN7SL582P-201ENST00000491078 279 ntBASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 GOLGA2P7-209ENST00000560408 745 ntBASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 RN7SL602P-201ENST00000578326 324 ntBASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 RN7SL718P-201ENST00000581254 303 ntBASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms