Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
RPAP1Q9BWH6 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPAP1Q9BWH6 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPAP1Q9BWH6 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPAP1Q9BWH6 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
RPAP1Q9BWH6 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPAP1Q9BWH6 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPAP1Q9BWH6 FLII-221ENST00000578558 2377 ntTSL 5 BASIC19.02■□□□□ 0.64
RPAP1Q9BWH6 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPAP1Q9BWH6 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPAP1Q9BWH6 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPAP1Q9BWH6 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RPAP1Q9BWH6 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RPAP1Q9BWH6 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RPAP1Q9BWH6 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPAP1Q9BWH6 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPAP1Q9BWH6 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPAP1Q9BWH6 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RPAP1Q9BWH6 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC19.02■□□□□ 0.64
RPAP1Q9BWH6 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RPAP1Q9BWH6 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC19.02■□□□□ 0.64
RPAP1Q9BWH6 AL442647.2-201ENST00000429864 857 ntBASIC19.02■□□□□ 0.64
RPAP1Q9BWH6 RPL13P2-201ENST00000440687 659 ntBASIC19.02■□□□□ 0.64
RPAP1Q9BWH6 MDH2-205ENST00000461263 648 ntTSL 2 BASIC19.02■□□□□ 0.64
RPAP1Q9BWH6 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC19.02■□□□□ 0.64
RPAP1Q9BWH6 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC19.02■□□□□ 0.64
RPAP1Q9BWH6 SNX29P1-201ENST00000548357 1007 ntBASIC19.02■□□□□ 0.64
RPAP1Q9BWH6 AC036164.1-201ENST00000570544 333 ntBASIC19.02■□□□□ 0.64
RPAP1Q9BWH6 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
RPAP1Q9BWH6 LINC01115-203ENST00000606068 577 ntBASIC19.02■□□□□ 0.64
RPAP1Q9BWH6 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPAP1Q9BWH6 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPAP1Q9BWH6 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPAP1Q9BWH6 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RPAP1Q9BWH6 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RPAP1Q9BWH6 SLC9A7P1-201ENST00000554295 3311 ntBASIC19.02■□□□□ 0.63
RPAP1Q9BWH6 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 AC020658.6-201ENST00000623564 1870 ntBASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 AC074338.1-201ENST00000416825 156 ntBASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 AC022494.1-201ENST00000466044 728 ntBASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 AC104596.2-201ENST00000512793 793 ntBASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 AP005482.1-201ENST00000563722 1273 ntBASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 AC010319.3-201ENST00000597028 470 ntBASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 AL033527.5-201ENST00000641382 801 ntBASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPAP1Q9BWH6 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC19■□□□□ 0.63
RPAP1Q9BWH6 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC19■□□□□ 0.63
RPAP1Q9BWH6 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPAP1Q9BWH6 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPAP1Q9BWH6 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC19■□□□□ 0.63
RPAP1Q9BWH6 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RPAP1Q9BWH6 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
RPAP1Q9BWH6 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RPAP1Q9BWH6 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RPAP1Q9BWH6 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC19■□□□□ 0.63
RPAP1Q9BWH6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RPAP1Q9BWH6 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19■□□□□ 0.63
RPAP1Q9BWH6 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC19■□□□□ 0.63
RPAP1Q9BWH6 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC19■□□□□ 0.63
RPAP1Q9BWH6 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC19■□□□□ 0.63
RPAP1Q9BWH6 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19■□□□□ 0.63
RPAP1Q9BWH6 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC19■□□□□ 0.63
RPAP1Q9BWH6 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC19■□□□□ 0.63
RPAP1Q9BWH6 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC19■□□□□ 0.63
RPAP1Q9BWH6 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC19■□□□□ 0.63
RPAP1Q9BWH6 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC19■□□□□ 0.63
RPAP1Q9BWH6 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms