Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.15■□□□□ 0.18
CDCA3Q99618 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CDCA3Q99618 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
CDCA3Q99618 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDCA3Q99618 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDCA3Q99618 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDCA3Q99618 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDCA3Q99618 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.15■□□□□ 0.18
CDCA3Q99618 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDCA3Q99618 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CDCA3Q99618 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CDCA3Q99618 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.14■□□□□ 0.17
CDCA3Q99618 KRT8P29-201ENST00000420409 1371 ntBASIC16.14■□□□□ 0.17
CDCA3Q99618 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
CDCA3Q99618 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDCA3Q99618 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CDCA3Q99618 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CDCA3Q99618 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CDCA3Q99618 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDCA3Q99618 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDCA3Q99618 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.14■□□□□ 0.17
CDCA3Q99618 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDCA3Q99618 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.14■□□□□ 0.17
CDCA3Q99618 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.14■□□□□ 0.17
CDCA3Q99618 AL136309.1-201ENST00000403917 691 ntBASIC16.14■□□□□ 0.17
CDCA3Q99618 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.14■□□□□ 0.17
CDCA3Q99618 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDCA3Q99618 POM121L8P-201ENST00000417732 1281 ntBASIC16.14■□□□□ 0.17
CDCA3Q99618 POM121L9P-203ENST00000441984 1285 ntBASIC16.14■□□□□ 0.17
CDCA3Q99618 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.14■□□□□ 0.17
CDCA3Q99618 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDCA3Q99618 AC022616.1-201ENST00000518688 554 ntBASIC16.14■□□□□ 0.17
CDCA3Q99618 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.14■□□□□ 0.17
CDCA3Q99618 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.14■□□□□ 0.17
CDCA3Q99618 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.14■□□□□ 0.17
CDCA3Q99618 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.14■□□□□ 0.17
CDCA3Q99618 RN7SL774P-201ENST00000577467 290 ntBASIC16.14■□□□□ 0.17
CDCA3Q99618 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.14■□□□□ 0.17
CDCA3Q99618 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.14■□□□□ 0.17
CDCA3Q99618 AP001002.3-201ENST00000623482 206 ntBASIC16.14■□□□□ 0.17
CDCA3Q99618 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDCA3Q99618 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
CDCA3Q99618 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CDCA3Q99618 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDCA3Q99618 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.14■□□□□ 0.17
CDCA3Q99618 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
CDCA3Q99618 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDCA3Q99618 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CDCA3Q99618 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDCA3Q99618 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDCA3Q99618 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDCA3Q99618 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDCA3Q99618 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.13■□□□□ 0.17
CDCA3Q99618 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDCA3Q99618 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDCA3Q99618 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDCA3Q99618 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDCA3Q99618 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDCA3Q99618 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDCA3Q99618 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CDCA3Q99618 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CDCA3Q99618 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDCA3Q99618 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.13■□□□□ 0.17
CDCA3Q99618 CHMP1AP1-201ENST00000445563 662 ntBASIC16.13■□□□□ 0.17
CDCA3Q99618 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDCA3Q99618 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC16.13■□□□□ 0.17
CDCA3Q99618 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDCA3Q99618 AC106794.1-201ENST00000506935 792 ntBASIC16.13■□□□□ 0.17
CDCA3Q99618 AC022217.1-201ENST00000521069 738 ntBASIC16.13■□□□□ 0.17
CDCA3Q99618 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.13■□□□□ 0.17
CDCA3Q99618 AL645728.2-202ENST00000641679 227 ntBASIC16.13■□□□□ 0.17
CDCA3Q99618 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDCA3Q99618 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDCA3Q99618 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
CDCA3Q99618 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.13■□□□□ 0.17
CDCA3Q99618 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.13■□□□□ 0.17
CDCA3Q99618 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.13■□□□□ 0.17
CDCA3Q99618 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDCA3Q99618 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDCA3Q99618 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDCA3Q99618 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDCA3Q99618 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDCA3Q99618 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDCA3Q99618 AL158070.2-201ENST00000623713 1621 ntBASIC16.12■□□□□ 0.17
CDCA3Q99618 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.12■□□□□ 0.17
CDCA3Q99618 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.12■□□□□ 0.17
CDCA3Q99618 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.12■□□□□ 0.17
CDCA3Q99618 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.12■□□□□ 0.17
CDCA3Q99618 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.12■□□□□ 0.17
CDCA3Q99618 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.12■□□□□ 0.17
CDCA3Q99618 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CDCA3Q99618 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDCA3Q99618 LDHBP1-201ENST00000455730 1119 ntBASIC16.12■□□□□ 0.17
CDCA3Q99618 AC021723.1-201ENST00000486306 515 ntBASIC16.12■□□□□ 0.17
CDCA3Q99618 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.12■□□□□ 0.17
CDCA3Q99618 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC16.12■□□□□ 0.17
CDCA3Q99618 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.12■□□□□ 0.17
CDCA3Q99618 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDCA3Q99618 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.12■□□□□ 0.17
CDCA3Q99618 MIR3907-201ENST00000579424 151 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms