Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 HYMAI.1-201ENST00000620949 238 ntBASIC14.9□□□□□ -0.02
NR1H4Q96RI1 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
NR1H4Q96RI1 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NR1H4Q96RI1 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H4Q96RI1 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H4Q96RI1 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H4Q96RI1 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H4Q96RI1 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NR1H4Q96RI1 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H4Q96RI1 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H4Q96RI1 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H4Q96RI1 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
NR1H4Q96RI1 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H4Q96RI1 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H4Q96RI1 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H4Q96RI1 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H4Q96RI1 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.89□□□□□ -0.03
NR1H4Q96RI1 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H4Q96RI1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.89□□□□□ -0.03
NR1H4Q96RI1 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
NR1H4Q96RI1 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
NR1H4Q96RI1 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H4Q96RI1 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.89□□□□□ -0.03
NR1H4Q96RI1 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
NR1H4Q96RI1 AC073592.5-201ENST00000624854 528 ntBASIC14.89□□□□□ -0.03
NR1H4Q96RI1 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.89□□□□□ -0.03
NR1H4Q96RI1 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.89□□□□□ -0.03
NR1H4Q96RI1 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.89□□□□□ -0.03
NR1H4Q96RI1 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.89□□□□□ -0.03
NR1H4Q96RI1 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H4Q96RI1 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H4Q96RI1 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H4Q96RI1 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.89□□□□□ -0.03
NR1H4Q96RI1 AC097359.2-201ENST00000604992 2389 ntBASIC14.89□□□□□ -0.03
NR1H4Q96RI1 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.89□□□□□ -0.03
NR1H4Q96RI1 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H4Q96RI1 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.89□□□□□ -0.03
NR1H4Q96RI1 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NR1H4Q96RI1 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 AC113367.3-201ENST00000508316 1912 ntBASIC14.88□□□□□ -0.03
NR1H4Q96RI1 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 GUSBP12-201ENST00000513727 720 ntBASIC14.88□□□□□ -0.03
NR1H4Q96RI1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 AL138831.2-201ENST00000606564 490 ntBASIC14.88□□□□□ -0.03
NR1H4Q96RI1 WASH6P-202ENST00000359512 1437 ntBASIC14.88□□□□□ -0.03
NR1H4Q96RI1 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NR1H4Q96RI1 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms