Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.82■□□□□ 0.44
SYNGAP1Q96PV0 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SYNGAP1Q96PV0 MIR648-201ENST00000385046 94 ntBASIC17.82■□□□□ 0.44
SYNGAP1Q96PV0 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.82■□□□□ 0.44
SYNGAP1Q96PV0 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.82■□□□□ 0.44
SYNGAP1Q96PV0 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.82■□□□□ 0.44
SYNGAP1Q96PV0 FTH1P14-201ENST00000482930 551 ntBASIC17.82■□□□□ 0.44
SYNGAP1Q96PV0 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.82■□□□□ 0.44
SYNGAP1Q96PV0 AC079316.1-201ENST00000548397 411 ntBASIC17.82■□□□□ 0.44
SYNGAP1Q96PV0 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SYNGAP1Q96PV0 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.82■□□□□ 0.44
SYNGAP1Q96PV0 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SYNGAP1Q96PV0 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SYNGAP1Q96PV0 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SYNGAP1Q96PV0 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.82■□□□□ 0.44
SYNGAP1Q96PV0 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.82■□□□□ 0.44
SYNGAP1Q96PV0 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SYNGAP1Q96PV0 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SYNGAP1Q96PV0 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SYNGAP1Q96PV0 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.82■□□□□ 0.44
SYNGAP1Q96PV0 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SYNGAP1Q96PV0 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SYNGAP1Q96PV0 AC079328.2-201ENST00000561241 3354 ntBASIC17.82■□□□□ 0.44
SYNGAP1Q96PV0 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
SYNGAP1Q96PV0 MTHFR-217ENST00000641820 1569 ntBASIC17.82■□□□□ 0.44
SYNGAP1Q96PV0 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.82■□□□□ 0.44
SYNGAP1Q96PV0 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 BRWD1P1-201ENST00000401091 371 ntBASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 AC016694.1-201ENST00000434179 700 ntBASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 AC093433.1-201ENST00000458048 571 ntBASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 MIR6787-201ENST00000616675 61 ntBASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 AL607033.1-201ENST00000623900 1599 ntBASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SYNGAP1Q96PV0 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SYNGAP1Q96PV0 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SYNGAP1Q96PV0 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SYNGAP1Q96PV0 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
SYNGAP1Q96PV0 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.8■□□□□ 0.44
SYNGAP1Q96PV0 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SYNGAP1Q96PV0 MSTO2P-201ENST00000314835 1709 ntBASIC17.8■□□□□ 0.44
SYNGAP1Q96PV0 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.8■□□□□ 0.44
SYNGAP1Q96PV0 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SYNGAP1Q96PV0 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SYNGAP1Q96PV0 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SYNGAP1Q96PV0 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.8■□□□□ 0.44
SYNGAP1Q96PV0 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SYNGAP1Q96PV0 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SYNGAP1Q96PV0 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.8■□□□□ 0.44
SYNGAP1Q96PV0 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
SYNGAP1Q96PV0 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.8■□□□□ 0.44
SYNGAP1Q96PV0 AC106760.1-201ENST00000508690 800 ntBASIC17.8■□□□□ 0.44
SYNGAP1Q96PV0 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.8■□□□□ 0.44
SYNGAP1Q96PV0 AC026410.3-201ENST00000514280 936 ntBASIC17.8■□□□□ 0.44
SYNGAP1Q96PV0 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.8■□□□□ 0.44
SYNGAP1Q96PV0 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.8■□□□□ 0.44
SYNGAP1Q96PV0 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms