Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.67■□□□□ 0.1
SH3KBP1Q96B97 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 FO393414.2-201ENST00000405153 598 ntBASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 SDHAP3-202ENST00000515467 728 ntBASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SH3KBP1Q96B97 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 AC105917.1-201ENST00000506637 2539 ntBASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 AC015922.1-201ENST00000421102 1152 ntBASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 AC135586.1-201ENST00000539323 574 ntBASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 AP003680.1-201ENST00000598970 3660 ntBASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 AL365209.1-201ENST00000624418 6473 ntBASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms