Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.03□□□□□ -0.16
RFT1Q96AA3 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFT1Q96AA3 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFT1Q96AA3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFT1Q96AA3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
RFT1Q96AA3 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.03□□□□□ -0.16
RFT1Q96AA3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.03□□□□□ -0.16
RFT1Q96AA3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RFT1Q96AA3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.03□□□□□ -0.16
RFT1Q96AA3 IGLL3P-201ENST00000412472 434 ntBASIC14.03□□□□□ -0.16
RFT1Q96AA3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
RFT1Q96AA3 PRSS29P-201ENST00000440800 595 ntBASIC14.03□□□□□ -0.16
RFT1Q96AA3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RFT1Q96AA3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFT1Q96AA3 UNC93B6-202ENST00000528242 690 ntBASIC14.03□□□□□ -0.16
RFT1Q96AA3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.03□□□□□ -0.16
RFT1Q96AA3 AL031432.2-201ENST00000566714 459 ntBASIC14.03□□□□□ -0.16
RFT1Q96AA3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.03□□□□□ -0.16
RFT1Q96AA3 AL928711.1-201ENST00000570165 459 ntBASIC14.03□□□□□ -0.16
RFT1Q96AA3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFT1Q96AA3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.03□□□□□ -0.16
RFT1Q96AA3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.03□□□□□ -0.16
RFT1Q96AA3 AC116407.3-201ENST00000623905 1129 ntBASIC14.03□□□□□ -0.16
RFT1Q96AA3 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.03□□□□□ -0.16
RFT1Q96AA3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.03□□□□□ -0.16
RFT1Q96AA3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RFT1Q96AA3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.03□□□□□ -0.16
RFT1Q96AA3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.03□□□□□ -0.16
RFT1Q96AA3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RFT1Q96AA3 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RFT1Q96AA3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RFT1Q96AA3 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.03□□□□□ -0.16
RFT1Q96AA3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RFT1Q96AA3 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
RFT1Q96AA3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFT1Q96AA3 U82695.1-201ENST00000635752 1889 ntBASIC14.03□□□□□ -0.16
RFT1Q96AA3 AC112693.3-201ENST00000624819 1983 ntBASIC14.03□□□□□ -0.16
RFT1Q96AA3 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFT1Q96AA3 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
RFT1Q96AA3 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.03□□□□□ -0.16
RFT1Q96AA3 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RFT1Q96AA3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.03□□□□□ -0.16
RFT1Q96AA3 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RFT1Q96AA3 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RFT1Q96AA3 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFT1Q96AA3 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFT1Q96AA3 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFT1Q96AA3 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RFT1Q96AA3 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RFT1Q96AA3 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RFT1Q96AA3 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RFT1Q96AA3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.02□□□□□ -0.16
RFT1Q96AA3 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.02□□□□□ -0.16
RFT1Q96AA3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
RFT1Q96AA3 C18orf15-201ENST00000623680 2534 ntBASIC14.02□□□□□ -0.16
RFT1Q96AA3 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RFT1Q96AA3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RFT1Q96AA3 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RFT1Q96AA3 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.02□□□□□ -0.16
RFT1Q96AA3 AC105250.1-201ENST00000509378 2057 ntBASIC14.02□□□□□ -0.16
RFT1Q96AA3 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RFT1Q96AA3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.02□□□□□ -0.16
RFT1Q96AA3 AC126335.2-201ENST00000623362 4637 ntBASIC14.02□□□□□ -0.16
RFT1Q96AA3 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RFT1Q96AA3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
RFT1Q96AA3 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RFT1Q96AA3 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RFT1Q96AA3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
RFT1Q96AA3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RFT1Q96AA3 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RFT1Q96AA3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
RFT1Q96AA3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.02□□□□□ -0.17
RFT1Q96AA3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RFT1Q96AA3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RFT1Q96AA3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.02□□□□□ -0.17
RFT1Q96AA3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.02□□□□□ -0.17
RFT1Q96AA3 CRYGEP-201ENST00000412192 528 ntBASIC14.02□□□□□ -0.17
RFT1Q96AA3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.02□□□□□ -0.17
RFT1Q96AA3 VN2R19P-201ENST00000442399 1052 ntBASIC14.02□□□□□ -0.17
RFT1Q96AA3 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.02□□□□□ -0.17
RFT1Q96AA3 AP002469.2-201ENST00000531724 424 ntBASIC14.02□□□□□ -0.17
RFT1Q96AA3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.02□□□□□ -0.17
RFT1Q96AA3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RFT1Q96AA3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.02□□□□□ -0.17
RFT1Q96AA3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.02□□□□□ -0.17
RFT1Q96AA3 AL645728.2-201ENST00000641974 660 ntBASIC14.02□□□□□ -0.17
RFT1Q96AA3 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
RFT1Q96AA3 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RFT1Q96AA3 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.02□□□□□ -0.17
RFT1Q96AA3 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RFT1Q96AA3 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RFT1Q96AA3 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RFT1Q96AA3 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RFT1Q96AA3 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.02□□□□□ -0.17
RFT1Q96AA3 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RFT1Q96AA3 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RFT1Q96AA3 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RFT1Q96AA3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
RFT1Q96AA3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
RFT1Q96AA3 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms