Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF4Q92544 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF4Q92544 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF4Q92544 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TM9SF4Q92544 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF4Q92544 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TM9SF4Q92544 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.92□□□□□ -0.02
TM9SF4Q92544 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF4Q92544 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.92□□□□□ -0.02
TM9SF4Q92544 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
TM9SF4Q92544 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF4Q92544 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TM9SF4Q92544 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF4Q92544 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF4Q92544 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.92□□□□□ -0.02
TM9SF4Q92544 AC022532.1-201ENST00000624563 1728 ntBASIC14.92□□□□□ -0.02
TM9SF4Q92544 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF4Q92544 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.92□□□□□ -0.02
TM9SF4Q92544 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.92□□□□□ -0.02
TM9SF4Q92544 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF4Q92544 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF4Q92544 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
TM9SF4Q92544 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TM9SF4Q92544 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
TM9SF4Q92544 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF4Q92544 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
TM9SF4Q92544 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TM9SF4Q92544 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF4Q92544 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF4Q92544 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF4Q92544 GPAA1P2-202ENST00000606848 1787 ntBASIC14.91□□□□□ -0.02
TM9SF4Q92544 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.91□□□□□ -0.02
TM9SF4Q92544 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.91□□□□□ -0.02
TM9SF4Q92544 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
TM9SF4Q92544 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.91□□□□□ -0.02
TM9SF4Q92544 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
TM9SF4Q92544 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF4Q92544 SPDYE17-201ENST00000412399 783 ntBASIC14.91□□□□□ -0.02
TM9SF4Q92544 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TM9SF4Q92544 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.91□□□□□ -0.02
TM9SF4Q92544 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.91□□□□□ -0.02
TM9SF4Q92544 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.91□□□□□ -0.02
TM9SF4Q92544 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.91□□□□□ -0.02
TM9SF4Q92544 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF4Q92544 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.91□□□□□ -0.02
TM9SF4Q92544 AC061975.2-201ENST00000581722 295 ntBASIC14.91□□□□□ -0.02
TM9SF4Q92544 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.91□□□□□ -0.02
TM9SF4Q92544 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF4Q92544 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TM9SF4Q92544 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF4Q92544 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF4Q92544 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TM9SF4Q92544 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF4Q92544 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF4Q92544 AC099063.4-201ENST00000641099 1602 ntBASIC14.91□□□□□ -0.02
TM9SF4Q92544 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF4Q92544 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TM9SF4Q92544 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.91□□□□□ -0.02
TM9SF4Q92544 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF4Q92544 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF4Q92544 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF4Q92544 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF4Q92544 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF4Q92544 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TM9SF4Q92544 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TM9SF4Q92544 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
TM9SF4Q92544 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TM9SF4Q92544 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TM9SF4Q92544 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.9□□□□□ -0.02
TM9SF4Q92544 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TM9SF4Q92544 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.9□□□□□ -0.02
TM9SF4Q92544 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TM9SF4Q92544 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TM9SF4Q92544 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TM9SF4Q92544 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TM9SF4Q92544 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TM9SF4Q92544 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TM9SF4Q92544 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TM9SF4Q92544 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.9□□□□□ -0.02
TM9SF4Q92544 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TM9SF4Q92544 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TM9SF4Q92544 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TM9SF4Q92544 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TM9SF4Q92544 AL512384.1-201ENST00000406683 331 ntBASIC14.9□□□□□ -0.02
TM9SF4Q92544 GNAQP1-201ENST00000444815 1067 ntBASIC14.9□□□□□ -0.02
TM9SF4Q92544 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.9□□□□□ -0.02
TM9SF4Q92544 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.9□□□□□ -0.02
TM9SF4Q92544 TPRX2P-201ENST00000535362 881 ntBASIC14.9□□□□□ -0.02
TM9SF4Q92544 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.9□□□□□ -0.02
TM9SF4Q92544 AL512361.1-201ENST00000554200 418 ntBASIC14.9□□□□□ -0.02
TM9SF4Q92544 AC044860.1-202ENST00000559481 777 ntBASIC14.9□□□□□ -0.02
TM9SF4Q92544 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.9□□□□□ -0.02
TM9SF4Q92544 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.9□□□□□ -0.02
TM9SF4Q92544 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.9□□□□□ -0.02
TM9SF4Q92544 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TM9SF4Q92544 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TM9SF4Q92544 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TM9SF4Q92544 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TM9SF4Q92544 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TM9SF4Q92544 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms