Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 EEF1DP4-201ENST00000446006 880 ntBASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 AL079307.3-201ENST00000556114 283 ntBASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 GRK6P1-201ENST00000400595 1711 ntBASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SIMC1Q8NDZ2 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 CICP14-201ENST00000629111 2732 ntBASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 AL080243.2-201ENST00000418783 582 ntBASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 CNN2P2-201ENST00000443536 909 ntBASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 CNN2P3-201ENST00000450201 906 ntBASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 KLF2P3-201ENST00000451977 1087 ntBASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 AC125807.1-201ENST00000483097 614 ntBASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 AL589739.1-201ENST00000607720 493 ntBASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 AL138828.2-201ENST00000615812 383 ntBASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 AL136317.3-201ENST00000618497 906 ntBASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SIMC1Q8NDZ2 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 AL035456.1-201ENST00000456064 1369 ntBASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms