Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.88□□□□□ -0.19
ZIC4Q8N9L1 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
ZIC4Q8N9L1 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
ZIC4Q8N9L1 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC4Q8N9L1 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.88□□□□□ -0.19
ZIC4Q8N9L1 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC4Q8N9L1 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
ZIC4Q8N9L1 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
ZIC4Q8N9L1 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.88□□□□□ -0.19
ZIC4Q8N9L1 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.88□□□□□ -0.19
ZIC4Q8N9L1 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.88□□□□□ -0.19
ZIC4Q8N9L1 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
ZIC4Q8N9L1 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC4Q8N9L1 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.88□□□□□ -0.19
ZIC4Q8N9L1 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.88□□□□□ -0.19
ZIC4Q8N9L1 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC4Q8N9L1 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
ZIC4Q8N9L1 AC000095.1-201ENST00000603208 874 ntBASIC13.88□□□□□ -0.19
ZIC4Q8N9L1 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC4Q8N9L1 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
ZIC4Q8N9L1 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.88□□□□□ -0.19
ZIC4Q8N9L1 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
ZIC4Q8N9L1 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC4Q8N9L1 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.88□□□□□ -0.19
ZIC4Q8N9L1 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC4Q8N9L1 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC4Q8N9L1 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.88□□□□□ -0.19
ZIC4Q8N9L1 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.88□□□□□ -0.19
ZIC4Q8N9L1 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC4Q8N9L1 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC4Q8N9L1 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC4Q8N9L1 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC4Q8N9L1 AC084364.1-201ENST00000551967 1556 ntBASIC13.88□□□□□ -0.19
ZIC4Q8N9L1 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 SLC7A15P-201ENST00000424028 1363 ntBASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 PPT1-215ENST00000641471 2368 ntBASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 AC093004.1-201ENST00000508850 424 ntBASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 AC112693.3-201ENST00000624819 1983 ntBASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 AC022532.1-201ENST00000624563 1728 ntBASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC4Q8N9L1 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC4Q8N9L1 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms