Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 MIR326-201ENST00000362220 95 ntBASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 GOLGA2P4-201ENST00000441462 777 ntBASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 KRT18P25-201ENST00000508931 1278 ntBASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 AC078819.1-201ENST00000547454 765 ntBASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 AC012085.1-201ENST00000548270 765 ntBASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 AC011477.6-201ENST00000604980 1927 ntBASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 AC006033.1-201ENST00000440505 426 ntBASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 AL118558.3-201ENST00000607414 1079 ntBASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 AC145423.3-201ENST00000615987 467 ntBASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 AL138709.1-201ENST00000614840 1693 ntBASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.18■□□□□ 0.18
NPAS3Q8IXF0 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS3Q8IXF0 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.17■□□□□ 0.18
NPAS3Q8IXF0 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.17■□□□□ 0.18
NPAS3Q8IXF0 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.17■□□□□ 0.18
NPAS3Q8IXF0 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
NPAS3Q8IXF0 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS3Q8IXF0 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS3Q8IXF0 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.17■□□□□ 0.18
NPAS3Q8IXF0 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS3Q8IXF0 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS3Q8IXF0 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS3Q8IXF0 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.17■□□□□ 0.18
NPAS3Q8IXF0 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS3Q8IXF0 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
NPAS3Q8IXF0 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS3Q8IXF0 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.17■□□□□ 0.18
NPAS3Q8IXF0 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NPAS3Q8IXF0 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms