Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.27□□□□□ -0.12
ATG4DQ86TL0 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ATG4DQ86TL0 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
ATG4DQ86TL0 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.27□□□□□ -0.12
ATG4DQ86TL0 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.27□□□□□ -0.12
ATG4DQ86TL0 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
ATG4DQ86TL0 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ATG4DQ86TL0 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ATG4DQ86TL0 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ATG4DQ86TL0 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
ATG4DQ86TL0 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.27□□□□□ -0.12
ATG4DQ86TL0 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.27□□□□□ -0.12
ATG4DQ86TL0 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.27□□□□□ -0.12
ATG4DQ86TL0 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ATG4DQ86TL0 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.27□□□□□ -0.12
ATG4DQ86TL0 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.27□□□□□ -0.12
ATG4DQ86TL0 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.27□□□□□ -0.12
ATG4DQ86TL0 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ATG4DQ86TL0 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ATG4DQ86TL0 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ATG4DQ86TL0 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ATG4DQ86TL0 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATG4DQ86TL0 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.27□□□□□ -0.13
ATG4DQ86TL0 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ATG4DQ86TL0 AC097493.3-201ENST00000509725 367 ntBASIC14.27□□□□□ -0.13
ATG4DQ86TL0 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.27□□□□□ -0.13
ATG4DQ86TL0 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ATG4DQ86TL0 AL512361.1-201ENST00000554200 418 ntBASIC14.27□□□□□ -0.13
ATG4DQ86TL0 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
ATG4DQ86TL0 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.27□□□□□ -0.13
ATG4DQ86TL0 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.27□□□□□ -0.13
ATG4DQ86TL0 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.27□□□□□ -0.13
ATG4DQ86TL0 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ATG4DQ86TL0 MIR4745-201ENST00000577608 62 ntBASIC14.27□□□□□ -0.13
ATG4DQ86TL0 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.27□□□□□ -0.13
ATG4DQ86TL0 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ATG4DQ86TL0 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.27□□□□□ -0.13
ATG4DQ86TL0 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.27□□□□□ -0.13
ATG4DQ86TL0 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.27□□□□□ -0.13
ATG4DQ86TL0 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATG4DQ86TL0 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATG4DQ86TL0 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATG4DQ86TL0 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ATG4DQ86TL0 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.27□□□□□ -0.13
ATG4DQ86TL0 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ATG4DQ86TL0 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATG4DQ86TL0 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATG4DQ86TL0 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 SLED1-202ENST00000512051 380 ntBASIC14.26□□□□□ -0.13
ATG4DQ86TL0 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 AC069120.2-201ENST00000524091 540 ntBASIC14.26□□□□□ -0.13
ATG4DQ86TL0 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 AC006058.4-201ENST00000624016 1670 ntBASIC14.26□□□□□ -0.13
ATG4DQ86TL0 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATG4DQ86TL0 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 AC126365.1-201ENST00000578585 1514 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms