Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 AP001160.2-201ENST00000596071 487 ntBASIC14.39□□□□□ -0.11
NIPAL3Q6P499 AC006538.3-201ENST00000612495 578 ntBASIC14.39□□□□□ -0.11
NIPAL3Q6P499 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.39□□□□□ -0.11
NIPAL3Q6P499 MIR600HG-201ENST00000449175 5984 ntBASIC14.39□□□□□ -0.11
NIPAL3Q6P499 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 TSEN15P1-201ENST00000423257 515 ntBASIC14.38□□□□□ -0.11
NIPAL3Q6P499 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 AC026150.2-201ENST00000564693 1156 ntBASIC14.38□□□□□ -0.11
NIPAL3Q6P499 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 GPALPP1-207ENST00000611650 899 ntBASIC14.38□□□□□ -0.11
NIPAL3Q6P499 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 LINC00628-201ENST00000628516 1289 ntBASIC14.38□□□□□ -0.11
NIPAL3Q6P499 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.38□□□□□ -0.11
NIPAL3Q6P499 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.38□□□□□ -0.11
NIPAL3Q6P499 AC009090.5-201ENST00000624886 2285 ntBASIC14.38□□□□□ -0.11
NIPAL3Q6P499 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 SPDYE14P-201ENST00000442619 822 ntBASIC14.37□□□□□ -0.11
NIPAL3Q6P499 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.37□□□□□ -0.11
NIPAL3Q6P499 AC003101.2-201ENST00000612557 442 ntBASIC14.37□□□□□ -0.11
NIPAL3Q6P499 MIR6080-201ENST00000617359 66 ntBASIC14.37□□□□□ -0.11
NIPAL3Q6P499 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms