Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 AC055876.3-201ENST00000431496 288 ntBASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 AC241585.1-201ENST00000433527 519 ntBASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 AC009477.1-201ENST00000452936 217 ntBASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 ZNF890P-202ENST00000530367 1156 ntBASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 AC009407.1-201ENST00000568958 598 ntBASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 AC138649.4-201ENST00000612222 287 ntBASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 MST1L-201ENST00000442552 2185 ntBASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CBWD3Q5JTY5 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.97■□□□□ 0.31
CBWD3Q5JTY5 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CBWD3Q5JTY5 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CBWD3Q5JTY5 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CBWD3Q5JTY5 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.97■□□□□ 0.31
CBWD3Q5JTY5 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CBWD3Q5JTY5 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.97■□□□□ 0.31
CBWD3Q5JTY5 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CBWD3Q5JTY5 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CBWD3Q5JTY5 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CBWD3Q5JTY5 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
CBWD3Q5JTY5 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CBWD3Q5JTY5 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CBWD3Q5JTY5 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CBWD3Q5JTY5 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.97■□□□□ 0.31
CBWD3Q5JTY5 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.97■□□□□ 0.31
CBWD3Q5JTY5 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.97■□□□□ 0.31
CBWD3Q5JTY5 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CBWD3Q5JTY5 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.97■□□□□ 0.31
CBWD3Q5JTY5 SDHAP3-202ENST00000515467 728 ntBASIC16.97■□□□□ 0.31
CBWD3Q5JTY5 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.97■□□□□ 0.31
CBWD3Q5JTY5 RFPL4AP1-201ENST00000530883 850 ntBASIC16.97■□□□□ 0.31
CBWD3Q5JTY5 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CBWD3Q5JTY5 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.97■□□□□ 0.31
CBWD3Q5JTY5 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.97■□□□□ 0.31
CBWD3Q5JTY5 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.97■□□□□ 0.31
CBWD3Q5JTY5 AP002414.2-201ENST00000591780 3365 ntBASIC16.97■□□□□ 0.31
CBWD3Q5JTY5 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CBWD3Q5JTY5 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CBWD3Q5JTY5 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CBWD3Q5JTY5 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CBWD3Q5JTY5 AC084364.1-201ENST00000551967 1556 ntBASIC16.97■□□□□ 0.31
CBWD3Q5JTY5 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CBWD3Q5JTY5 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.97■□□□□ 0.31
CBWD3Q5JTY5 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
CBWD3Q5JTY5 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CBWD3Q5JTY5 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.97■□□□□ 0.31
CBWD3Q5JTY5 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CBWD3Q5JTY5 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.96■□□□□ 0.31
CBWD3Q5JTY5 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CBWD3Q5JTY5 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CBWD3Q5JTY5 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CBWD3Q5JTY5 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.96■□□□□ 0.31
CBWD3Q5JTY5 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CBWD3Q5JTY5 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CBWD3Q5JTY5 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CBWD3Q5JTY5 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.96■□□□□ 0.31
CBWD3Q5JTY5 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.96■□□□□ 0.31
CBWD3Q5JTY5 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CBWD3Q5JTY5 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CBWD3Q5JTY5 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CBWD3Q5JTY5 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CBWD3Q5JTY5 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CBWD3Q5JTY5 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms