Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CCDC96Q2M329 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC96Q2M329 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC96Q2M329 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC96Q2M329 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC96Q2M329 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CCDC96Q2M329 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC96Q2M329 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC96Q2M329 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC96Q2M329 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.53
CCDC96Q2M329 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.33■□□□□ 0.53
CCDC96Q2M329 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.33■□□□□ 0.53
CCDC96Q2M329 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC96Q2M329 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC96Q2M329 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC96Q2M329 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.33■□□□□ 0.53
CCDC96Q2M329 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC96Q2M329 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.33■□□□□ 0.53
CCDC96Q2M329 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC96Q2M329 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC96Q2M329 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC96Q2M329 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC96Q2M329 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CCDC96Q2M329 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC96Q2M329 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC96Q2M329 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
CCDC96Q2M329 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC96Q2M329 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC96Q2M329 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC96Q2M329 WFDC1-204ENST00000613603 549 ntBASIC18.33■□□□□ 0.52
CCDC96Q2M329 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC96Q2M329 IGHV3-72-202ENST00000621503 303 ntBASIC18.33■□□□□ 0.52
CCDC96Q2M329 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC96Q2M329 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC96Q2M329 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC96Q2M329 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC96Q2M329 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC96Q2M329 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC96Q2M329 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC96Q2M329 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC96Q2M329 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC96Q2M329 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC96Q2M329 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC96Q2M329 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC96Q2M329 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CCDC96Q2M329 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC96Q2M329 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC96Q2M329 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC96Q2M329 AC068587.6-202ENST00000641839 5619 ntBASIC18.32■□□□□ 0.52
CCDC96Q2M329 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC96Q2M329 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CCDC96Q2M329 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
CCDC96Q2M329 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC96Q2M329 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC96Q2M329 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CCDC96Q2M329 C8orf49-201ENST00000525043 1968 ntBASIC18.32■□□□□ 0.52
CCDC96Q2M329 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CCDC96Q2M329 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC96Q2M329 TOMM22P5-201ENST00000416399 439 ntBASIC18.32■□□□□ 0.52
CCDC96Q2M329 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC96Q2M329 FAM86LP-201ENST00000478302 853 ntBASIC18.32■□□□□ 0.52
CCDC96Q2M329 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC96Q2M329 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC96Q2M329 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC96Q2M329 AC132938.2-201ENST00000579188 680 ntBASIC18.32■□□□□ 0.52
CCDC96Q2M329 MIR4313-201ENST00000580760 101 ntBASIC18.32■□□□□ 0.52
CCDC96Q2M329 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC96Q2M329 AL591163.1-201ENST00000641757 987 ntBASIC18.32■□□□□ 0.52
CCDC96Q2M329 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC96Q2M329 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC96Q2M329 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC96Q2M329 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
CCDC96Q2M329 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC96Q2M329 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC96Q2M329 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC96Q2M329 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC96Q2M329 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CCDC96Q2M329 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC96Q2M329 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC96Q2M329 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC96Q2M329 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.31■□□□□ 0.52
CCDC96Q2M329 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC96Q2M329 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC96Q2M329 AL603832.2-201ENST00000566195 2125 ntBASIC18.31■□□□□ 0.52
CCDC96Q2M329 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCDC96Q2M329 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC96Q2M329 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
CCDC96Q2M329 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CCDC96Q2M329 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCDC96Q2M329 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC96Q2M329 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCDC96Q2M329 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CCDC96Q2M329 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.31■□□□□ 0.52
CCDC96Q2M329 AL512384.1-201ENST00000406683 331 ntBASIC18.31■□□□□ 0.52
CCDC96Q2M329 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
CCDC96Q2M329 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.31■□□□□ 0.52
CCDC96Q2M329 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC96Q2M329 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC96Q2M329 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC96Q2M329 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms