Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HTRA3P83110 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HTRA3P83110 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HTRA3P83110 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
HTRA3P83110 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HTRA3P83110 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HTRA3P83110 AC092638.2-201ENST00000441105 947 ntBASIC17.8■□□□□ 0.44
HTRA3P83110 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HTRA3P83110 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC17.8■□□□□ 0.44
HTRA3P83110 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC17.8■□□□□ 0.44
HTRA3P83110 AC138466.3-201ENST00000619983 221 ntBASIC17.8■□□□□ 0.44
HTRA3P83110 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
HTRA3P83110 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HTRA3P83110 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HTRA3P83110 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HTRA3P83110 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HTRA3P83110 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
HTRA3P83110 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.8■□□□□ 0.44
HTRA3P83110 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC17.8■□□□□ 0.44
HTRA3P83110 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HTRA3P83110 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.8■□□□□ 0.44
HTRA3P83110 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HTRA3P83110 AC136759.1-202ENST00000530858 2194 ntBASIC17.8■□□□□ 0.44
HTRA3P83110 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HTRA3P83110 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC17.8■□□□□ 0.44
HTRA3P83110 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.8■□□□□ 0.44
HTRA3P83110 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
HTRA3P83110 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HTRA3P83110 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HTRA3P83110 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
HTRA3P83110 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.79■□□□□ 0.44
HTRA3P83110 HTR7P1-202ENST00000624664 4411 ntBASIC17.79■□□□□ 0.44
HTRA3P83110 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HTRA3P83110 AC020931.1-201ENST00000589622 1346 ntBASIC17.79■□□□□ 0.44
HTRA3P83110 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.79■□□□□ 0.44
HTRA3P83110 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
HTRA3P83110 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HTRA3P83110 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HTRA3P83110 JPT2-203ENST00000382711 894 ntTSL 4 BASIC17.79■□□□□ 0.44
HTRA3P83110 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HTRA3P83110 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HTRA3P83110 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HTRA3P83110 AL354861.1-201ENST00000445213 355 ntBASIC17.79■□□□□ 0.44
HTRA3P83110 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC17.79■□□□□ 0.44
HTRA3P83110 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC17.79■□□□□ 0.44
HTRA3P83110 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC17.79■□□□□ 0.44
HTRA3P83110 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HTRA3P83110 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HTRA3P83110 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC17.79■□□□□ 0.44
HTRA3P83110 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HTRA3P83110 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC17.79■□□□□ 0.44
HTRA3P83110 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.79■□□□□ 0.44
HTRA3P83110 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HTRA3P83110 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HTRA3P83110 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HTRA3P83110 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.79■□□□□ 0.44
HTRA3P83110 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.79■□□□□ 0.44
HTRA3P83110 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.79■□□□□ 0.44
HTRA3P83110 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
HTRA3P83110 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HTRA3P83110 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.78■□□□□ 0.44
HTRA3P83110 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.78■□□□□ 0.44
HTRA3P83110 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HTRA3P83110 AL592424.1-201ENST00000563624 1536 ntBASIC17.78■□□□□ 0.44
HTRA3P83110 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.78■□□□□ 0.44
HTRA3P83110 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HTRA3P83110 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HTRA3P83110 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
HTRA3P83110 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HTRA3P83110 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
HTRA3P83110 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HTRA3P83110 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC17.78■□□□□ 0.44
HTRA3P83110 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HTRA3P83110 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC17.78■□□□□ 0.44
HTRA3P83110 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC17.78■□□□□ 0.44
HTRA3P83110 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC17.78■□□□□ 0.44
HTRA3P83110 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC17.78■□□□□ 0.44
HTRA3P83110 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC17.78■□□□□ 0.44
HTRA3P83110 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC17.78■□□□□ 0.44
HTRA3P83110 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
HTRA3P83110 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC17.78■□□□□ 0.44
HTRA3P83110 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC17.78■□□□□ 0.44
HTRA3P83110 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HTRA3P83110 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
HTRA3P83110 AC084262.1-201ENST00000567818 751 ntBASIC17.78■□□□□ 0.44
HTRA3P83110 MBP-238ENST00000580402 915 ntTSL 5 BASIC17.78■□□□□ 0.44
HTRA3P83110 AP005212.2-201ENST00000584979 510 ntBASIC17.78■□□□□ 0.44
HTRA3P83110 LINC01783-202ENST00000614408 828 ntBASIC17.78■□□□□ 0.44
HTRA3P83110 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC17.78■□□□□ 0.44
HTRA3P83110 BX284668.2-205ENST00000619677 828 ntBASIC17.78■□□□□ 0.44
HTRA3P83110 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.78■□□□□ 0.44
HTRA3P83110 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HTRA3P83110 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
HTRA3P83110 KRT8P14-201ENST00000414254 1442 ntBASIC17.78■□□□□ 0.44
HTRA3P83110 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HTRA3P83110 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HTRA3P83110 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HTRA3P83110 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
HTRA3P83110 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.78■□□□□ 0.44
HTRA3P83110 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms