Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 PNMT-203ENST00000581428 677 ntTSL 2 BASIC11.2□□□□□ -0.62
RPL39P62891 MIR4321-201ENST00000592276 80 ntBASIC11.2□□□□□ -0.62
RPL39P62891 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC11.2□□□□□ -0.62
RPL39P62891 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RPL39P62891 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
RPL39P62891 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RPL39P62891 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RPL39P62891 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RPL39P62891 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RPL39P62891 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
RPL39P62891 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RPL39P62891 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC11.2□□□□□ -0.62
RPL39P62891 NIN-202ENST00000324330 4364 ntTSL 5 BASIC11.2□□□□□ -0.62
RPL39P62891 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RPL39P62891 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RPL39P62891 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
RPL39P62891 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC11.2□□□□□ -0.62
RPL39P62891 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC11.2□□□□□ -0.62
RPL39P62891 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RPL39P62891 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RPL39P62891 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RPL39P62891 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RPL39P62891 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
RPL39P62891 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RPL39P62891 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC11.19□□□□□ -0.62
RPL39P62891 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RPL39P62891 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC11.19□□□□□ -0.62
RPL39P62891 FLII-221ENST00000578558 2377 ntTSL 5 BASIC11.19□□□□□ -0.62
RPL39P62891 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC11.19□□□□□ -0.62
RPL39P62891 STK33-217ENST00000534493 1895 ntTSL 2 BASIC11.19□□□□□ -0.62
RPL39P62891 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC11.19□□□□□ -0.62
RPL39P62891 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC11.19□□□□□ -0.62
RPL39P62891 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
RPL39P62891 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RPL39P62891 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RPL39P62891 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RPL39P62891 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RPL39P62891 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RPL39P62891 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RPL39P62891 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC11.19□□□□□ -0.62
RPL39P62891 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RPL39P62891 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RPL39P62891 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RPL39P62891 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RPL39P62891 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RPL39P62891 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RPL39P62891 KRT18P27-201ENST00000427733 1299 ntBASIC11.19□□□□□ -0.62
RPL39P62891 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
RPL39P62891 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RPL39P62891 IGHV3-65-201ENST00000523210 341 ntBASIC11.19□□□□□ -0.62
RPL39P62891 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
RPL39P62891 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC11.19□□□□□ -0.62
RPL39P62891 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC11.19□□□□□ -0.62
RPL39P62891 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC11.19□□□□□ -0.62
RPL39P62891 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
RPL39P62891 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
RPL39P62891 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC11.19□□□□□ -0.62
RPL39P62891 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
RPL39P62891 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RPL39P62891 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RPL39P62891 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RPL39P62891 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RPL39P62891 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
RPL39P62891 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RPL39P62891 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
RPL39P62891 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RPL39P62891 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RPL39P62891 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC11.19□□□□□ -0.62
RPL39P62891 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RPL39P62891 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
RPL39P62891 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC11.19□□□□□ -0.62
RPL39P62891 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RPL39P62891 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RPL39P62891 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RPL39P62891 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RPL39P62891 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPL39P62891 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPL39P62891 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC11.18□□□□□ -0.62
RPL39P62891 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPL39P62891 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPL39P62891 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
RPL39P62891 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPL39P62891 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPL39P62891 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPL39P62891 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RPL39P62891 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
RPL39P62891 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPL39P62891 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
RPL39P62891 POLL-206ENST00000370172 2308 ntTSL 2 BASIC11.18□□□□□ -0.62
RPL39P62891 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC11.18□□□□□ -0.62
RPL39P62891 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPL39P62891 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPL39P62891 STRN-202ENST00000379213 2254 ntTSL 5 BASIC11.18□□□□□ -0.62
RPL39P62891 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPL39P62891 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC11.18□□□□□ -0.62
RPL39P62891 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPL39P62891 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPL39P62891 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
RPL39P62891 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
RPL39P62891 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms