Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.8■□□□□ 0.12
AP1S1P61966 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.8■□□□□ 0.12
AP1S1P61966 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.8■□□□□ 0.12
AP1S1P61966 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
AP1S1P61966 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S1P61966 SPDYE22P-201ENST00000582158 798 ntBASIC15.8■□□□□ 0.12
AP1S1P61966 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.8■□□□□ 0.12
AP1S1P61966 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.8■□□□□ 0.12
AP1S1P61966 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S1P61966 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S1P61966 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.8■□□□□ 0.12
AP1S1P61966 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
AP1S1P61966 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S1P61966 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S1P61966 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.8■□□□□ 0.12
AP1S1P61966 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S1P61966 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S1P61966 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
AP1S1P61966 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
AP1S1P61966 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S1P61966 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
AP1S1P61966 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S1P61966 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S1P61966 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S1P61966 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AP1S1P61966 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP1S1P61966 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.79■□□□□ 0.12
AP1S1P61966 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP1S1P61966 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.79■□□□□ 0.12
AP1S1P61966 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.79■□□□□ 0.12
AP1S1P61966 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP1S1P61966 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
AP1S1P61966 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
AP1S1P61966 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
AP1S1P61966 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.79■□□□□ 0.12
AP1S1P61966 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP1S1P61966 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
AP1S1P61966 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP1S1P61966 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.79■□□□□ 0.12
AP1S1P61966 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP1S1P61966 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP1S1P61966 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP1S1P61966 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.79■□□□□ 0.12
AP1S1P61966 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.79■□□□□ 0.12
AP1S1P61966 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP1S1P61966 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.79■□□□□ 0.12
AP1S1P61966 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.79■□□□□ 0.12
AP1S1P61966 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.79■□□□□ 0.12
AP1S1P61966 FAM86LP-201ENST00000478302 853 ntBASIC15.79■□□□□ 0.12
AP1S1P61966 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.79■□□□□ 0.12
AP1S1P61966 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
AP1S1P61966 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP1S1P61966 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.79■□□□□ 0.12
AP1S1P61966 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
AP1S1P61966 AC020658.6-201ENST00000623564 1870 ntBASIC15.79■□□□□ 0.12
AP1S1P61966 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP1S1P61966 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.79■□□□□ 0.12
AP1S1P61966 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP1S1P61966 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.79■□□□□ 0.12
AP1S1P61966 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP1S1P61966 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
AP1S1P61966 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.79■□□□□ 0.12
AP1S1P61966 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
AP1S1P61966 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.79■□□□□ 0.12
AP1S1P61966 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP1S1P61966 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP1S1P61966 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S1P61966 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.78■□□□□ 0.12
AP1S1P61966 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
AP1S1P61966 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
AP1S1P61966 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
AP1S1P61966 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S1P61966 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S1P61966 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.78■□□□□ 0.12
AP1S1P61966 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S1P61966 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.78■□□□□ 0.12
AP1S1P61966 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S1P61966 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S1P61966 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.78■□□□□ 0.12
AP1S1P61966 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S1P61966 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
AP1S1P61966 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S1P61966 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S1P61966 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S1P61966 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.78■□□□□ 0.12
AP1S1P61966 RPL5P21-201ENST00000404620 815 ntBASIC15.78■□□□□ 0.12
AP1S1P61966 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.78■□□□□ 0.12
AP1S1P61966 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
AP1S1P61966 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
AP1S1P61966 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.78■□□□□ 0.12
AP1S1P61966 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.78■□□□□ 0.12
AP1S1P61966 AC123567.1-201ENST00000548294 1261 ntBASIC15.78■□□□□ 0.12
AP1S1P61966 TP53TG3HP-202ENST00000569755 579 ntBASIC15.78■□□□□ 0.12
AP1S1P61966 AC027307.3-201ENST00000594262 1100 ntBASIC15.78■□□□□ 0.12
AP1S1P61966 AL662799.1-202ENST00000614205 422 ntBASIC15.78■□□□□ 0.12
AP1S1P61966 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
AP1S1P61966 AC007431.3-201ENST00000623221 587 ntBASIC15.78■□□□□ 0.12
AP1S1P61966 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S1P61966 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
AP1S1P61966 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms