Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLDN6P56747 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN6P56747 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.08■□□□□ 0
CLDN6P56747 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CLDN6P56747 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN6P56747 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN6P56747 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN6P56747 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN6P56747 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.08■□□□□ 0
CLDN6P56747 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLDN6P56747 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN6P56747 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN6P56747 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLDN6P56747 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN6P56747 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLDN6P56747 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN6P56747 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CLDN6P56747 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLDN6P56747 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.07■□□□□ 0
CLDN6P56747 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
CLDN6P56747 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CLDN6P56747 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.07■□□□□ 0
CLDN6P56747 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CLDN6P56747 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.07■□□□□ 0
CLDN6P56747 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.07■□□□□ 0
CLDN6P56747 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLDN6P56747 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLDN6P56747 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLDN6P56747 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLDN6P56747 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLDN6P56747 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CLDN6P56747 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.07■□□□□ 0
CLDN6P56747 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.07■□□□□ 0
CLDN6P56747 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLDN6P56747 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
CLDN6P56747 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLDN6P56747 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLDN6P56747 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
CLDN6P56747 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLDN6P56747 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLDN6P56747 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.07■□□□□ 0
CLDN6P56747 AL590640.2-201ENST00000457038 527 ntBASIC15.07■□□□□ 0
CLDN6P56747 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC15.07■□□□□ 0
CLDN6P56747 AP001258.2-201ENST00000529891 490 ntBASIC15.07■□□□□ 0
CLDN6P56747 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.07■□□□□ 0
CLDN6P56747 AC079316.1-201ENST00000548397 411 ntBASIC15.07■□□□□ 0
CLDN6P56747 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLDN6P56747 HNRNPUP1-201ENST00000554987 333 ntBASIC15.07■□□□□ 0
CLDN6P56747 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CLDN6P56747 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC15.07■□□□□ 0
CLDN6P56747 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.07■□□□□ 0
CLDN6P56747 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLDN6P56747 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.07■□□□□ 0
CLDN6P56747 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLDN6P56747 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLDN6P56747 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLDN6P56747 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLDN6P56747 FLJ38576-201ENST00000623820 2459 ntBASIC15.07■□□□□ 0
CLDN6P56747 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLDN6P56747 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLDN6P56747 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLDN6P56747 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CLDN6P56747 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.07■□□□□ 0
CLDN6P56747 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLDN6P56747 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLDN6P56747 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.07■□□□□ 0
CLDN6P56747 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLDN6P56747 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLDN6P56747 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.07■□□□□ 0
CLDN6P56747 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLDN6P56747 PCDHA14-201ENST00000506751 2298 ntBASIC15.06■□□□□ 0
CLDN6P56747 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLDN6P56747 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLDN6P56747 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLDN6P56747 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.06■□□□□ 0
CLDN6P56747 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.06■□□□□ 0
CLDN6P56747 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLDN6P56747 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CLDN6P56747 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLDN6P56747 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC15.06■□□□□ 0
CLDN6P56747 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.06■□□□□ 0
CLDN6P56747 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.06■□□□□ 0
CLDN6P56747 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.06■□□□□ 0
CLDN6P56747 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLDN6P56747 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC15.06■□□□□ 0
CLDN6P56747 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CLDN6P56747 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC15.06■□□□□ 0
CLDN6P56747 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLDN6P56747 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
CLDN6P56747 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLDN6P56747 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.06■□□□□ 0
CLDN6P56747 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
CLDN6P56747 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.06■□□□□ 0
CLDN6P56747 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLDN6P56747 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLDN6P56747 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLDN6P56747 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.06■□□□□ 0
CLDN6P56747 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLDN6P56747 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.06■□□□□ 0
CLDN6P56747 AC018695.7-201ENST00000624587 2492 ntBASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms