Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC11.72□□□□□ -0.53
CMC4P56277 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC11.72□□□□□ -0.53
CMC4P56277 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CMC4P56277 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CMC4P56277 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
CMC4P56277 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CMC4P56277 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC11.72□□□□□ -0.53
CMC4P56277 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC11.72□□□□□ -0.53
CMC4P56277 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CMC4P56277 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC11.72□□□□□ -0.53
CMC4P56277 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CMC4P56277 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CMC4P56277 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CMC4P56277 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
CMC4P56277 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
CMC4P56277 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
CMC4P56277 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CMC4P56277 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
CMC4P56277 RERG-209ENST00000546331 1383 ntTSL 2 BASIC11.72□□□□□ -0.53
CMC4P56277 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CMC4P56277 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC11.72□□□□□ -0.53
CMC4P56277 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CMC4P56277 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC11.72□□□□□ -0.53
CMC4P56277 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CMC4P56277 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
CMC4P56277 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
CMC4P56277 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CMC4P56277 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CMC4P56277 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CMC4P56277 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC11.72□□□□□ -0.53
CMC4P56277 PIN1P1-201ENST00000412108 996 ntBASIC11.72□□□□□ -0.53
CMC4P56277 RPL13P2-201ENST00000440687 659 ntBASIC11.72□□□□□ -0.53
CMC4P56277 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC11.72□□□□□ -0.53
CMC4P56277 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC11.72□□□□□ -0.53
CMC4P56277 AC055876.2-201ENST00000531834 546 ntBASIC11.72□□□□□ -0.53
CMC4P56277 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC11.72□□□□□ -0.53
CMC4P56277 TPRX2P-201ENST00000535362 881 ntBASIC11.72□□□□□ -0.53
CMC4P56277 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC11.72□□□□□ -0.53
CMC4P56277 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC11.72□□□□□ -0.53
CMC4P56277 GREM1-201ENST00000560677 623 ntTSL 4 BASIC11.72□□□□□ -0.53
CMC4P56277 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC11.72□□□□□ -0.53
CMC4P56277 AC036164.1-201ENST00000570544 333 ntBASIC11.72□□□□□ -0.53
CMC4P56277 AC099568.2-201ENST00000609194 695 ntBASIC11.72□□□□□ -0.53
CMC4P56277 RNA5-8SN1-201ENST00000610460 153 ntBASIC11.72□□□□□ -0.53
CMC4P56277 RNA5-8SN5-202ENST00000612463 153 ntBASIC11.72□□□□□ -0.53
CMC4P56277 RNA5-8SN4-201ENST00000613359 153 ntBASIC11.72□□□□□ -0.53
CMC4P56277 RNA5-8SN5-201ENST00000619471 153 ntBASIC11.72□□□□□ -0.53
CMC4P56277 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CMC4P56277 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
CMC4P56277 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CMC4P56277 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC11.72□□□□□ -0.53
CMC4P56277 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC11.72□□□□□ -0.53
CMC4P56277 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CMC4P56277 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC11.72□□□□□ -0.53
CMC4P56277 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC11.72□□□□□ -0.53
CMC4P56277 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CMC4P56277 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CMC4P56277 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC11.72□□□□□ -0.53
CMC4P56277 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
CMC4P56277 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
CMC4P56277 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CMC4P56277 AP005117.1-202ENST00000581724 1908 ntBASIC11.72□□□□□ -0.53
CMC4P56277 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CMC4P56277 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
CMC4P56277 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC11.72□□□□□ -0.53
CMC4P56277 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC11.72□□□□□ -0.53
CMC4P56277 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CMC4P56277 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CMC4P56277 TK1-203ENST00000588734 1681 ntTSL 2 BASIC11.71□□□□□ -0.53
CMC4P56277 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC11.71□□□□□ -0.53
CMC4P56277 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
CMC4P56277 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CMC4P56277 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CMC4P56277 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CMC4P56277 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC11.71□□□□□ -0.53
CMC4P56277 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CMC4P56277 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
CMC4P56277 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CMC4P56277 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CMC4P56277 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC11.71□□□□□ -0.53
CMC4P56277 SBF1P1-201ENST00000444527 5631 ntBASIC11.71□□□□□ -0.53
CMC4P56277 OR2I1P-210ENST00000642037 4691 ntBASIC11.71□□□□□ -0.53
CMC4P56277 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CMC4P56277 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
CMC4P56277 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CMC4P56277 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CMC4P56277 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC11.71□□□□□ -0.53
CMC4P56277 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CMC4P56277 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
CMC4P56277 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CMC4P56277 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC11.71□□□□□ -0.53
CMC4P56277 RASL12-203ENST00000434605 982 ntTSL 2 BASIC11.71□□□□□ -0.53
CMC4P56277 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC11.71□□□□□ -0.53
CMC4P56277 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CMC4P56277 OARD1-208ENST00000469104 704 ntTSL 2 BASIC11.71□□□□□ -0.53
CMC4P56277 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC11.71□□□□□ -0.53
CMC4P56277 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
CMC4P56277 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC11.71□□□□□ -0.53
CMC4P56277 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC11.71□□□□□ -0.53
CMC4P56277 COX11-202ENST00000571584 1108 ntTSL 2 BASIC11.71□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms