Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VCPP55072 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VCPP55072 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.89■□□□□ 0.29
VCPP55072 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
VCPP55072 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VCPP55072 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VCPP55072 FAM220BP-201ENST00000377689 816 ntBASIC16.89■□□□□ 0.29
VCPP55072 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
VCPP55072 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VCPP55072 AC104989.1-201ENST00000519711 778 ntBASIC16.89■□□□□ 0.29
VCPP55072 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.89■□□□□ 0.29
VCPP55072 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.89■□□□□ 0.29
VCPP55072 CTBP2P3-201ENST00000585629 1255 ntBASIC16.89■□□□□ 0.29
VCPP55072 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.89■□□□□ 0.29
VCPP55072 AC008735.3-201ENST00000596646 500 ntBASIC16.89■□□□□ 0.29
VCPP55072 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
VCPP55072 AC244093.1-201ENST00000610837 814 ntBASIC16.89■□□□□ 0.29
VCPP55072 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VCPP55072 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.89■□□□□ 0.29
VCPP55072 LINC00554-201ENST00000564841 3011 ntBASIC16.89■□□□□ 0.29
VCPP55072 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
VCPP55072 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VCPP55072 AC068418.2-201ENST00000577309 3703 ntBASIC16.89■□□□□ 0.29
VCPP55072 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
VCPP55072 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
VCPP55072 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VCPP55072 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
VCPP55072 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.89■□□□□ 0.29
VCPP55072 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VCPP55072 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
VCPP55072 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VCPP55072 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VCPP55072 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VCPP55072 AC020907.1-201ENST00000616460 1350 ntBASIC16.89■□□□□ 0.29
VCPP55072 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
VCPP55072 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCPP55072 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VCPP55072 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
VCPP55072 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.88■□□□□ 0.29
VCPP55072 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VCPP55072 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.88■□□□□ 0.29
VCPP55072 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
VCPP55072 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCPP55072 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.88■□□□□ 0.29
VCPP55072 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCPP55072 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.88■□□□□ 0.29
VCPP55072 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.88■□□□□ 0.29
VCPP55072 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.88■□□□□ 0.29
VCPP55072 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCPP55072 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
VCPP55072 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCPP55072 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCPP55072 ELK2AP-201ENST00000392510 1007 ntBASIC16.88■□□□□ 0.29
VCPP55072 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.88■□□□□ 0.29
VCPP55072 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.88■□□□□ 0.29
VCPP55072 MYCLP2-201ENST00000449268 967 ntBASIC16.88■□□□□ 0.29
VCPP55072 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
VCPP55072 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.88■□□□□ 0.29
VCPP55072 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
VCPP55072 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VCPP55072 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
VCPP55072 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.88■□□□□ 0.29
VCPP55072 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.88■□□□□ 0.29
VCPP55072 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VCPP55072 AC092384.3-202ENST00000564646 2873 ntBASIC16.88■□□□□ 0.29
VCPP55072 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.88■□□□□ 0.29
VCPP55072 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
VCPP55072 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.88■□□□□ 0.29
VCPP55072 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCPP55072 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.88■□□□□ 0.29
VCPP55072 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.88■□□□□ 0.29
VCPP55072 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VCPP55072 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.88■□□□□ 0.29
VCPP55072 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
VCPP55072 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VCPP55072 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VCPP55072 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCPP55072 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCPP55072 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCPP55072 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.87■□□□□ 0.29
VCPP55072 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCPP55072 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VCPP55072 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VCPP55072 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
VCPP55072 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCPP55072 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCPP55072 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
VCPP55072 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
VCPP55072 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.87■□□□□ 0.29
VCPP55072 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
VCPP55072 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VCPP55072 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCPP55072 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.87■□□□□ 0.29
VCPP55072 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VCPP55072 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VCPP55072 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VCPP55072 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.87■□□□□ 0.29
VCPP55072 AL080243.2-201ENST00000418783 582 ntBASIC16.87■□□□□ 0.29
VCPP55072 ELK1P1-201ENST00000485699 580 ntBASIC16.87■□□□□ 0.29
VCPP55072 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms