Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.04■□□□□ -0
NR1H2P55055 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.04■□□□□ -0
NR1H2P55055 AC010654.1-201ENST00000615722 808 ntBASIC15.04■□□□□ -0
NR1H2P55055 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.04■□□□□ -0
NR1H2P55055 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NR1H2P55055 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NR1H2P55055 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NR1H2P55055 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NR1H2P55055 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.04■□□□□ -0
NR1H2P55055 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NR1H2P55055 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.04■□□□□ -0
NR1H2P55055 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NR1H2P55055 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.04■□□□□ -0
NR1H2P55055 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.04■□□□□ -0
NR1H2P55055 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
NR1H2P55055 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.04■□□□□ -0
NR1H2P55055 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.04■□□□□ -0
NR1H2P55055 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NR1H2P55055 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.04■□□□□ -0
NR1H2P55055 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.04■□□□□ -0
NR1H2P55055 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.04■□□□□ -0
NR1H2P55055 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
NR1H2P55055 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.03■□□□□ -0
NR1H2P55055 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.03■□□□□ -0
NR1H2P55055 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
NR1H2P55055 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
NR1H2P55055 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.03■□□□□ -0
NR1H2P55055 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.03■□□□□ -0
NR1H2P55055 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.03■□□□□ -0
NR1H2P55055 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
NR1H2P55055 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NR1H2P55055 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NR1H2P55055 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
NR1H2P55055 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
NR1H2P55055 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
NR1H2P55055 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
NR1H2P55055 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NR1H2P55055 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NR1H2P55055 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.03■□□□□ -0
NR1H2P55055 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NR1H2P55055 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
NR1H2P55055 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
NR1H2P55055 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
NR1H2P55055 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
NR1H2P55055 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
NR1H2P55055 MRPL20P1-201ENST00000400819 433 ntBASIC15.03■□□□□ -0
NR1H2P55055 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.03■□□□□ -0
NR1H2P55055 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NR1H2P55055 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.03■□□□□ -0
NR1H2P55055 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.03■□□□□ -0
NR1H2P55055 AC023274.1-201ENST00000418278 595 ntBASIC15.03■□□□□ -0
NR1H2P55055 HMGN1P19-201ENST00000436976 333 ntBASIC15.03■□□□□ -0
NR1H2P55055 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.03■□□□□ -0
NR1H2P55055 AC004967.1-201ENST00000453589 447 ntBASIC15.03■□□□□ -0
NR1H2P55055 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.03■□□□□ -0
NR1H2P55055 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.03■□□□□ -0
NR1H2P55055 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.03■□□□□ -0
NR1H2P55055 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.03■□□□□ -0
NR1H2P55055 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
NR1H2P55055 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.03■□□□□ -0
NR1H2P55055 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.03■□□□□ -0
NR1H2P55055 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.03■□□□□ -0
NR1H2P55055 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.03■□□□□ -0
NR1H2P55055 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
NR1H2P55055 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.03■□□□□ -0
NR1H2P55055 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
NR1H2P55055 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.03■□□□□ -0
NR1H2P55055 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
NR1H2P55055 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NR1H2P55055 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.03■□□□□ -0
NR1H2P55055 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
NR1H2P55055 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NR1H2P55055 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.03■□□□□ -0
NR1H2P55055 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NR1H2P55055 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
NR1H2P55055 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
NR1H2P55055 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
NR1H2P55055 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NR1H2P55055 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NR1H2P55055 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
NR1H2P55055 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.02■□□□□ -0
NR1H2P55055 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
NR1H2P55055 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
NR1H2P55055 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.02■□□□□ -0
NR1H2P55055 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.02■□□□□ -0
NR1H2P55055 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.02■□□□□ -0
NR1H2P55055 AC112693.3-201ENST00000624819 1983 ntBASIC15.02■□□□□ -0
NR1H2P55055 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.02■□□□□ -0
NR1H2P55055 AJ011931.1-201ENST00000618749 2492 ntBASIC15.02■□□□□ -0
NR1H2P55055 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.02■□□□□ -0
NR1H2P55055 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NR1H2P55055 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NR1H2P55055 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
NR1H2P55055 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NR1H2P55055 MCCD1P2-201ENST00000423228 335 ntBASIC15.02■□□□□ -0
NR1H2P55055 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.02■□□□□ -0
NR1H2P55055 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.02■□□□□ -0
NR1H2P55055 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.02■□□□□ -0
NR1H2P55055 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.02■□□□□ -0
NR1H2P55055 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms