Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLTCL1P53675 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CLTCL1P53675 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
CLTCL1P53675 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CLTCL1P53675 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
CLTCL1P53675 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC22.02■■□□□ 1.12
CLTCL1P53675 ADM-202ENST00000524948 584 ntTSL 2 BASIC22.02■■□□□ 1.12
CLTCL1P53675 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC22.02■■□□□ 1.12
CLTCL1P53675 AL157414.3-201ENST00000624276 1954 ntBASIC22.02■■□□□ 1.12
CLTCL1P53675 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CLTCL1P53675 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CLTCL1P53675 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC22.02■■□□□ 1.12
CLTCL1P53675 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CLTCL1P53675 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CLTCL1P53675 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CLTCL1P53675 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC22.02■■□□□ 1.12
CLTCL1P53675 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CLTCL1P53675 STK33-217ENST00000534493 1895 ntTSL 2 BASIC22.02■■□□□ 1.12
CLTCL1P53675 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CLTCL1P53675 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC22.02■■□□□ 1.12
CLTCL1P53675 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CLTCL1P53675 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CLTCL1P53675 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
CLTCL1P53675 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CLTCL1P53675 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CLTCL1P53675 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC22.02■■□□□ 1.12
CLTCL1P53675 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
CLTCL1P53675 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
CLTCL1P53675 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.11
CLTCL1P53675 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
CLTCL1P53675 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC22.02■■□□□ 1.11
CLTCL1P53675 AC016700.1-201ENST00000429424 312 ntBASIC22.02■■□□□ 1.11
CLTCL1P53675 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC22.02■■□□□ 1.11
CLTCL1P53675 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC22.02■■□□□ 1.11
CLTCL1P53675 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC22.02■■□□□ 1.11
CLTCL1P53675 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC22.02■■□□□ 1.11
CLTCL1P53675 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC22.02■■□□□ 1.11
CLTCL1P53675 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC22.02■■□□□ 1.11
CLTCL1P53675 NKG7-204ENST00000595217 816 ntTSL 2 BASIC22.02■■□□□ 1.11
CLTCL1P53675 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC22.02■■□□□ 1.11
CLTCL1P53675 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC22.02■■□□□ 1.11
CLTCL1P53675 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC22.02■■□□□ 1.11
CLTCL1P53675 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.11
CLTCL1P53675 ANKRD30BP2-201ENST00000435744 1610 ntBASIC22.01■■□□□ 1.11
CLTCL1P53675 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
CLTCL1P53675 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC22.01■■□□□ 1.11
CLTCL1P53675 PCDHB19P-201ENST00000570871 2371 ntBASIC22.01■■□□□ 1.11
CLTCL1P53675 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CLTCL1P53675 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC22.01■■□□□ 1.11
CLTCL1P53675 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
CLTCL1P53675 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
CLTCL1P53675 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
CLTCL1P53675 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
CLTCL1P53675 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC22.01■■□□□ 1.11
CLTCL1P53675 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC22.01■■□□□ 1.11
CLTCL1P53675 AKR7A2P1-201ENST00000460134 915 ntBASIC22.01■■□□□ 1.11
CLTCL1P53675 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CLTCL1P53675 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CLTCL1P53675 AC100850.1-201ENST00000506768 649 ntBASIC22.01■■□□□ 1.11
CLTCL1P53675 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CLTCL1P53675 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC22.01■■□□□ 1.11
CLTCL1P53675 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CLTCL1P53675 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC22.01■■□□□ 1.11
CLTCL1P53675 BANP-204ENST00000393208 2283 ntTSL 2 BASIC22■■□□□ 1.11
CLTCL1P53675 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC22■■□□□ 1.11
CLTCL1P53675 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC22■■□□□ 1.11
CLTCL1P53675 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC22■■□□□ 1.11
CLTCL1P53675 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC22■■□□□ 1.11
CLTCL1P53675 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CLTCL1P53675 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC22■■□□□ 1.11
CLTCL1P53675 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC22■■□□□ 1.11
CLTCL1P53675 AC022616.1-201ENST00000518688 554 ntBASIC22■■□□□ 1.11
CLTCL1P53675 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
CLTCL1P53675 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CLTCL1P53675 SLC9A7P1-202ENST00000556476 2239 ntBASIC22■■□□□ 1.11
CLTCL1P53675 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC22■■□□□ 1.11
CLTCL1P53675 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CLTCL1P53675 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CLTCL1P53675 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
CLTCL1P53675 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CLTCL1P53675 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CLTCL1P53675 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
CLTCL1P53675 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC22■■□□□ 1.11
CLTCL1P53675 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CLTCL1P53675 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CLTCL1P53675 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC21.99■■□□□ 1.11
CLTCL1P53675 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLTCL1P53675 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC21.99■■□□□ 1.11
CLTCL1P53675 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLTCL1P53675 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLTCL1P53675 NKAIN1P1-201ENST00000435754 582 ntBASIC21.99■■□□□ 1.11
CLTCL1P53675 AC022217.1-201ENST00000521069 738 ntBASIC21.99■■□□□ 1.11
CLTCL1P53675 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC21.99■■□□□ 1.11
CLTCL1P53675 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC21.99■■□□□ 1.11
CLTCL1P53675 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC21.99■■□□□ 1.11
CLTCL1P53675 AC138649.2-201ENST00000615886 705 ntBASIC21.99■■□□□ 1.11
CLTCL1P53675 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC21.99■■□□□ 1.11
CLTCL1P53675 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLTCL1P53675 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC21.99■■□□□ 1.11
CLTCL1P53675 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms