Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.18■□□□□ 0.66
NUP98P52948 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NUP98P52948 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.18■□□□□ 0.66
NUP98P52948 RPS15-201ENST00000233609 534 ntTSL 2 BASIC19.18■□□□□ 0.66
NUP98P52948 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NUP98P52948 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NUP98P52948 SMS-201ENST00000379404 1174 ntTSL 3 BASIC19.18■□□□□ 0.66
NUP98P52948 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NUP98P52948 AC022217.1-201ENST00000521069 738 ntBASIC19.18■□□□□ 0.66
NUP98P52948 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC19.18■□□□□ 0.66
NUP98P52948 AC104982.3-201ENST00000581995 514 ntBASIC19.18■□□□□ 0.66
NUP98P52948 RPS15-205ENST00000586686 562 ntTSL 5 BASIC19.18■□□□□ 0.66
NUP98P52948 RPS15-208ENST00000591804 711 ntTSL 5 BASIC19.18■□□□□ 0.66
NUP98P52948 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NUP98P52948 AC138649.2-201ENST00000615886 705 ntBASIC19.18■□□□□ 0.66
NUP98P52948 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NUP98P52948 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NUP98P52948 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NUP98P52948 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NUP98P52948 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NUP98P52948 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NUP98P52948 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NUP98P52948 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
NUP98P52948 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NUP98P52948 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NUP98P52948 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC19.17■□□□□ 0.66
NUP98P52948 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NUP98P52948 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.17■□□□□ 0.66
NUP98P52948 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.17■□□□□ 0.66
NUP98P52948 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NUP98P52948 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NUP98P52948 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NUP98P52948 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
NUP98P52948 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC19.17■□□□□ 0.66
NUP98P52948 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NUP98P52948 DEF8-202ENST00000418391 852 ntTSL 2 BASIC19.17■□□□□ 0.66
NUP98P52948 AC020914.3-201ENST00000594712 304 ntBASIC19.17■□□□□ 0.66
NUP98P52948 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
NUP98P52948 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
NUP98P52948 AC138466.3-201ENST00000619983 221 ntBASIC19.17■□□□□ 0.66
NUP98P52948 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NUP98P52948 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC19.17■□□□□ 0.66
NUP98P52948 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NUP98P52948 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NUP98P52948 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.17■□□□□ 0.66
NUP98P52948 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NUP98P52948 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC19.17■□□□□ 0.66
NUP98P52948 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC19.17■□□□□ 0.66
NUP98P52948 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.17■□□□□ 0.66
NUP98P52948 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NUP98P52948 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NUP98P52948 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NUP98P52948 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NUP98P52948 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUP98P52948 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.16■□□□□ 0.66
NUP98P52948 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUP98P52948 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUP98P52948 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NUP98P52948 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NUP98P52948 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC19.16■□□□□ 0.66
NUP98P52948 HNRNPA1P32-201ENST00000396326 963 ntBASIC19.16■□□□□ 0.66
NUP98P52948 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
NUP98P52948 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
NUP98P52948 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC19.16■□□□□ 0.66
NUP98P52948 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC19.16■□□□□ 0.66
NUP98P52948 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC19.16■□□□□ 0.66
NUP98P52948 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC19.16■□□□□ 0.66
NUP98P52948 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC19.16■□□□□ 0.66
NUP98P52948 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC19.16■□□□□ 0.66
NUP98P52948 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC19.16■□□□□ 0.66
NUP98P52948 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUP98P52948 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUP98P52948 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC19.16■□□□□ 0.66
NUP98P52948 MST1L-201ENST00000442552 2185 ntBASIC19.16■□□□□ 0.66
NUP98P52948 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUP98P52948 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUP98P52948 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NUP98P52948 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
NUP98P52948 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUP98P52948 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC19.16■□□□□ 0.66
NUP98P52948 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUP98P52948 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUP98P52948 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUP98P52948 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUP98P52948 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUP98P52948 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUP98P52948 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUP98P52948 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NUP98P52948 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
NUP98P52948 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC19.16■□□□□ 0.66
NUP98P52948 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NUP98P52948 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC19.16■□□□□ 0.66
NUP98P52948 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC19.16■□□□□ 0.66
NUP98P52948 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUP98P52948 FTLP10-202ENST00000505798 471 ntBASIC19.16■□□□□ 0.66
NUP98P52948 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC19.16■□□□□ 0.66
NUP98P52948 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC19.16■□□□□ 0.66
NUP98P52948 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC19.16■□□□□ 0.66
NUP98P52948 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC19.16■□□□□ 0.66
NUP98P52948 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms