Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CENPAP49450 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CENPAP49450 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.38□□□□□ -0.11
CENPAP49450 CICP13-201ENST00000422015 2789 ntBASIC14.38□□□□□ -0.11
CENPAP49450 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.38□□□□□ -0.11
CENPAP49450 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
CENPAP49450 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CENPAP49450 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CENPAP49450 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CENPAP49450 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.38□□□□□ -0.11
CENPAP49450 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CENPAP49450 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CENPAP49450 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPAP49450 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPAP49450 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CENPAP49450 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPAP49450 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPAP49450 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPAP49450 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPAP49450 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPAP49450 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPAP49450 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CENPAP49450 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
CENPAP49450 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.37□□□□□ -0.11
CENPAP49450 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CENPAP49450 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
CENPAP49450 AL591424.1-201ENST00000442569 1213 ntBASIC14.37□□□□□ -0.11
CENPAP49450 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
CENPAP49450 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.37□□□□□ -0.11
CENPAP49450 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPAP49450 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CENPAP49450 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CENPAP49450 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CENPAP49450 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
CENPAP49450 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CENPAP49450 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.37□□□□□ -0.11
CENPAP49450 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.37□□□□□ -0.11
CENPAP49450 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.37□□□□□ -0.11
CENPAP49450 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPAP49450 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.37□□□□□ -0.11
CENPAP49450 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CENPAP49450 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CENPAP49450 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.37□□□□□ -0.11
CENPAP49450 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CENPAP49450 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPAP49450 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CENPAP49450 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.37□□□□□ -0.11
CENPAP49450 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CENPAP49450 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
CENPAP49450 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPAP49450 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPAP49450 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CENPAP49450 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPAP49450 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CENPAP49450 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPAP49450 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CENPAP49450 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CENPAP49450 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.37□□□□□ -0.11
CENPAP49450 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CENPAP49450 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.37□□□□□ -0.11
CENPAP49450 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CENPAP49450 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CENPAP49450 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.36□□□□□ -0.11
CENPAP49450 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.36□□□□□ -0.11
CENPAP49450 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.36□□□□□ -0.11
CENPAP49450 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.36□□□□□ -0.11
CENPAP49450 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CENPAP49450 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CENPAP49450 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.36□□□□□ -0.11
CENPAP49450 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CENPAP49450 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CENPAP49450 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CENPAP49450 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CENPAP49450 TMBIM7P-203ENST00000641617 1718 ntBASIC14.36□□□□□ -0.11
CENPAP49450 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CENPAP49450 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.36□□□□□ -0.11
CENPAP49450 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CENPAP49450 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CENPAP49450 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CENPAP49450 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CENPAP49450 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CENPAP49450 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CENPAP49450 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.36□□□□□ -0.11
CENPAP49450 AL671277.1-201ENST00000429656 993 ntBASIC14.36□□□□□ -0.11
CENPAP49450 FDX1P1-201ENST00000449115 551 ntBASIC14.36□□□□□ -0.11
CENPAP49450 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.36□□□□□ -0.11
CENPAP49450 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
CENPAP49450 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.36□□□□□ -0.11
CENPAP49450 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.36□□□□□ -0.11
CENPAP49450 RARRES2P8-201ENST00000566335 367 ntBASIC14.36□□□□□ -0.11
CENPAP49450 AL138918.1-201ENST00000568306 659 ntBASIC14.36□□□□□ -0.11
CENPAP49450 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.36□□□□□ -0.11
CENPAP49450 BX640515.1-201ENST00000617215 977 ntBASIC14.36□□□□□ -0.11
CENPAP49450 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CENPAP49450 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CENPAP49450 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.36□□□□□ -0.11
CENPAP49450 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.36□□□□□ -0.11
CENPAP49450 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
CENPAP49450 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CENPAP49450 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms