Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AC103702.1-201ENST00000548801 2630 ntBASIC15.16■□□□□ 0.02
SLC6A12P48065 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A12P48065 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC6A12P48065 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A12P48065 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A12P48065 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC6A12P48065 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC6A12P48065 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC6A12P48065 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC6A12P48065 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A12P48065 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A12P48065 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SLC6A12P48065 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC6A12P48065 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A12P48065 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
SLC6A12P48065 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A12P48065 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A12P48065 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC6A12P48065 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A12P48065 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC6A12P48065 DBET-201ENST00000630918 3363 ntBASIC15.15■□□□□ 0.02
SLC6A12P48065 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A12P48065 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC6A12P48065 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A12P48065 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A12P48065 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A12P48065 AC023024.2-201ENST00000623561 1993 ntBASIC15.15■□□□□ 0.02
SLC6A12P48065 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
SLC6A12P48065 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SLC6A12P48065 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC6A12P48065 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A12P48065 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A12P48065 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A12P48065 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A12P48065 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SLC6A12P48065 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A12P48065 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A12P48065 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A12P48065 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC6A12P48065 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.15■□□□□ 0.02
SLC6A12P48065 AC241585.1-201ENST00000433527 519 ntBASIC15.15■□□□□ 0.02
SLC6A12P48065 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.15■□□□□ 0.02
SLC6A12P48065 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A12P48065 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC6A12P48065 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC6A12P48065 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.15■□□□□ 0.02
SLC6A12P48065 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.15■□□□□ 0.02
SLC6A12P48065 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC6A12P48065 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SLC6A12P48065 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC6A12P48065 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A12P48065 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SLC6A12P48065 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A12P48065 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC6A12P48065 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC6A12P48065 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A12P48065 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SLC6A12P48065 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A12P48065 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A12P48065 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SLC6A12P48065 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SLC6A12P48065 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC6A12P48065 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A12P48065 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A12P48065 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
SLC6A12P48065 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A12P48065 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A12P48065 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A12P48065 AC091951.1-201ENST00000512854 2465 ntBASIC15.15■□□□□ 0.02
SLC6A12P48065 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC6A12P48065 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A12P48065 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC6A12P48065 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC6A12P48065 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC6A12P48065 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A12P48065 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A12P48065 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A12P48065 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A12P48065 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A12P48065 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A12P48065 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC6A12P48065 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A12P48065 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A12P48065 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A12P48065 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC6A12P48065 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SLC6A12P48065 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC6A12P48065 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
SLC6A12P48065 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A12P48065 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A12P48065 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC6A12P48065 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
SLC6A12P48065 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC6A12P48065 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A12P48065 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A12P48065 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A12P48065 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A12P48065 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A12P48065 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A12P48065 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms