Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.96■□□□□ 0.31
TNFSF9P41273 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TNFSF9P41273 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TNFSF9P41273 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
TNFSF9P41273 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.96■□□□□ 0.3
TNFSF9P41273 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TNFSF9P41273 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
TNFSF9P41273 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.96■□□□□ 0.3
TNFSF9P41273 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TNFSF9P41273 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TNFSF9P41273 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TNFSF9P41273 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TNFSF9P41273 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNFSF9P41273 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
TNFSF9P41273 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.95■□□□□ 0.3
TNFSF9P41273 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNFSF9P41273 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNFSF9P41273 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNFSF9P41273 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNFSF9P41273 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TNFSF9P41273 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNFSF9P41273 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.95■□□□□ 0.3
TNFSF9P41273 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TNFSF9P41273 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNFSF9P41273 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.95■□□□□ 0.3
TNFSF9P41273 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TNFSF9P41273 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.95■□□□□ 0.3
TNFSF9P41273 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNFSF9P41273 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNFSF9P41273 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TNFSF9P41273 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNFSF9P41273 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.95■□□□□ 0.3
TNFSF9P41273 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TNFSF9P41273 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.95■□□□□ 0.3
TNFSF9P41273 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.95■□□□□ 0.3
TNFSF9P41273 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.95■□□□□ 0.3
TNFSF9P41273 VDAC1P7-201ENST00000462417 847 ntBASIC16.95■□□□□ 0.3
TNFSF9P41273 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.95■□□□□ 0.3
TNFSF9P41273 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.95■□□□□ 0.3
TNFSF9P41273 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
TNFSF9P41273 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TNFSF9P41273 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.95■□□□□ 0.3
TNFSF9P41273 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.95■□□□□ 0.3
TNFSF9P41273 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNFSF9P41273 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TNFSF9P41273 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNFSF9P41273 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNFSF9P41273 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNFSF9P41273 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.95■□□□□ 0.3
TNFSF9P41273 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TNFSF9P41273 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TNFSF9P41273 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNFSF9P41273 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNFSF9P41273 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TNFSF9P41273 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TNFSF9P41273 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TNFSF9P41273 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
TNFSF9P41273 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TNFSF9P41273 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TNFSF9P41273 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TNFSF9P41273 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TNFSF9P41273 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.94■□□□□ 0.3
TNFSF9P41273 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.94■□□□□ 0.3
TNFSF9P41273 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
TNFSF9P41273 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TNFSF9P41273 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TNFSF9P41273 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TNFSF9P41273 AP006294.1-201ENST00000415407 339 ntBASIC16.94■□□□□ 0.3
TNFSF9P41273 NME2P1-201ENST00000426182 414 ntBASIC16.94■□□□□ 0.3
TNFSF9P41273 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TNFSF9P41273 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.94■□□□□ 0.3
TNFSF9P41273 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.94■□□□□ 0.3
TNFSF9P41273 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.94■□□□□ 0.3
TNFSF9P41273 AL359711.2-201ENST00000563105 872 ntBASIC16.94■□□□□ 0.3
TNFSF9P41273 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.94■□□□□ 0.3
TNFSF9P41273 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.94■□□□□ 0.3
TNFSF9P41273 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TNFSF9P41273 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TNFSF9P41273 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
TNFSF9P41273 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TNFSF9P41273 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.94■□□□□ 0.3
TNFSF9P41273 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TNFSF9P41273 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TNFSF9P41273 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.94■□□□□ 0.3
TNFSF9P41273 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
TNFSF9P41273 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TNFSF9P41273 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TNFSF9P41273 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TNFSF9P41273 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TNFSF9P41273 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TNFSF9P41273 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFSF9P41273 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.93■□□□□ 0.3
TNFSF9P41273 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TNFSF9P41273 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFSF9P41273 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFSF9P41273 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.93■□□□□ 0.3
TNFSF9P41273 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFSF9P41273 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFSF9P41273 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TNFSF9P41273 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms