Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.95■□□□□ 0.62
CHMLP26374 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHMLP26374 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMLP26374 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.95■□□□□ 0.62
CHMLP26374 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CHMLP26374 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMLP26374 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMLP26374 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMLP26374 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHMLP26374 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
CHMLP26374 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC18.95■□□□□ 0.62
CHMLP26374 ZEB1-AS1-208ENST00000607166 2503 ntBASIC18.95■□□□□ 0.62
CHMLP26374 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMLP26374 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.95■□□□□ 0.62
CHMLP26374 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMLP26374 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHMLP26374 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMLP26374 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMLP26374 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHMLP26374 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMLP26374 AC023824.1-201ENST00000562945 2975 ntBASIC18.94■□□□□ 0.62
CHMLP26374 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHMLP26374 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
CHMLP26374 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMLP26374 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC18.94■□□□□ 0.62
CHMLP26374 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMLP26374 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.94■□□□□ 0.62
CHMLP26374 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.94■□□□□ 0.62
CHMLP26374 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.94■□□□□ 0.62
CHMLP26374 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.94■□□□□ 0.62
CHMLP26374 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.94■□□□□ 0.62
CHMLP26374 AC067863.1-201ENST00000494933 530 ntBASIC18.94■□□□□ 0.62
CHMLP26374 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.94■□□□□ 0.62
CHMLP26374 DUX4L27-201ENST00000554796 1261 ntBASIC18.94■□□□□ 0.62
CHMLP26374 AC044860.1-202ENST00000559481 777 ntBASIC18.94■□□□□ 0.62
CHMLP26374 AL590560.3-201ENST00000623350 461 ntBASIC18.94■□□□□ 0.62
CHMLP26374 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHMLP26374 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHMLP26374 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC18.94■□□□□ 0.62
CHMLP26374 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMLP26374 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMLP26374 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMLP26374 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMLP26374 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHMLP26374 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMLP26374 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CHMLP26374 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CHMLP26374 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMLP26374 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMLP26374 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHMLP26374 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHMLP26374 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMLP26374 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CHMLP26374 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMLP26374 AC100757.3-201ENST00000622361 1406 ntBASIC18.93■□□□□ 0.62
CHMLP26374 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMLP26374 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHMLP26374 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHMLP26374 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMLP26374 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHMLP26374 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHMLP26374 AC015922.1-201ENST00000421102 1152 ntBASIC18.93■□□□□ 0.62
CHMLP26374 TSSK5P-201ENST00000423978 907 ntBASIC18.93■□□□□ 0.62
CHMLP26374 FAM86GP-201ENST00000448322 971 ntBASIC18.93■□□□□ 0.62
CHMLP26374 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.93■□□□□ 0.62
CHMLP26374 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.93■□□□□ 0.62
CHMLP26374 AC015910.1-201ENST00000579400 975 ntBASIC18.93■□□□□ 0.62
CHMLP26374 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.93■□□□□ 0.62
CHMLP26374 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHMLP26374 AC074044.1-201ENST00000609673 707 ntBASIC18.93■□□□□ 0.62
CHMLP26374 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMLP26374 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMLP26374 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.93■□□□□ 0.62
CHMLP26374 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMLP26374 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHMLP26374 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMLP26374 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.93■□□□□ 0.62
CHMLP26374 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.93■□□□□ 0.62
CHMLP26374 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMLP26374 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CHMLP26374 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMLP26374 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CHMLP26374 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMLP26374 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMLP26374 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHMLP26374 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.92■□□□□ 0.62
CHMLP26374 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.92■□□□□ 0.62
CHMLP26374 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMLP26374 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.92■□□□□ 0.62
CHMLP26374 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMLP26374 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMLP26374 RPL5P21-201ENST00000404620 815 ntBASIC18.92■□□□□ 0.62
CHMLP26374 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.92■□□□□ 0.62
CHMLP26374 TOMM22P5-201ENST00000416399 439 ntBASIC18.92■□□□□ 0.62
CHMLP26374 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
CHMLP26374 SDHAP3-202ENST00000515467 728 ntBASIC18.92■□□□□ 0.62
CHMLP26374 ZNF890P-202ENST00000530367 1156 ntBASIC18.92■□□□□ 0.62
CHMLP26374 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHMLP26374 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CHMLP26374 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms