Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.39□□□□□ -0.11
CD53P19397 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD53P19397 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD53P19397 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD53P19397 AC012569.1-201ENST00000591191 1524 ntBASIC14.39□□□□□ -0.11
CD53P19397 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CD53P19397 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD53P19397 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD53P19397 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD53P19397 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD53P19397 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD53P19397 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD53P19397 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.39□□□□□ -0.11
CD53P19397 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD53P19397 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD53P19397 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD53P19397 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD53P19397 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CD53P19397 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD53P19397 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
CD53P19397 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD53P19397 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.38□□□□□ -0.11
CD53P19397 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.38□□□□□ -0.11
CD53P19397 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD53P19397 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.38□□□□□ -0.11
CD53P19397 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD53P19397 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.38□□□□□ -0.11
CD53P19397 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD53P19397 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CD53P19397 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD53P19397 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD53P19397 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD53P19397 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD53P19397 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD53P19397 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CD53P19397 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD53P19397 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.38□□□□□ -0.11
CD53P19397 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.38□□□□□ -0.11
CD53P19397 AC245100.5-201ENST00000452108 331 ntBASIC14.38□□□□□ -0.11
CD53P19397 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD53P19397 AP005018.1-201ENST00000525475 301 ntBASIC14.38□□□□□ -0.11
CD53P19397 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.38□□□□□ -0.11
CD53P19397 AC109635.5-201ENST00000533593 962 ntBASIC14.38□□□□□ -0.11
CD53P19397 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD53P19397 MIR6080-201ENST00000617359 66 ntBASIC14.38□□□□□ -0.11
CD53P19397 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.38□□□□□ -0.11
CD53P19397 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CD53P19397 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD53P19397 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.38□□□□□ -0.11
CD53P19397 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD53P19397 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD53P19397 AC007292.2-201ENST00000593524 1812 ntBASIC14.38□□□□□ -0.11
CD53P19397 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD53P19397 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD53P19397 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD53P19397 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD53P19397 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.38□□□□□ -0.11
CD53P19397 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.38□□□□□ -0.11
CD53P19397 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CD53P19397 NORAD-201ENST00000565493 5339 ntBASIC14.38□□□□□ -0.11
CD53P19397 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.38□□□□□ -0.11
CD53P19397 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CD53P19397 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.38□□□□□ -0.11
CD53P19397 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.38□□□□□ -0.11
CD53P19397 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.38□□□□□ -0.11
CD53P19397 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.37□□□□□ -0.11
CD53P19397 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD53P19397 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD53P19397 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD53P19397 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD53P19397 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CD53P19397 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CD53P19397 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CD53P19397 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CD53P19397 AC138035.3-201ENST00000622706 2791 ntBASIC14.37□□□□□ -0.11
CD53P19397 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.37□□□□□ -0.11
CD53P19397 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD53P19397 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD53P19397 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD53P19397 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD53P19397 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CD53P19397 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD53P19397 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CD53P19397 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD53P19397 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD53P19397 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD53P19397 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD53P19397 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.37□□□□□ -0.11
CD53P19397 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.37□□□□□ -0.11
CD53P19397 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.37□□□□□ -0.11
CD53P19397 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.37□□□□□ -0.11
CD53P19397 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.37□□□□□ -0.11
CD53P19397 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD53P19397 CRB3P1-201ENST00000449338 276 ntBASIC14.37□□□□□ -0.11
CD53P19397 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.37□□□□□ -0.11
CD53P19397 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD53P19397 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.37□□□□□ -0.11
CD53P19397 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.37□□□□□ -0.11
CD53P19397 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.37□□□□□ -0.11
CD53P19397 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms