Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CTSDP07339 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.13□□□□□ -0.31
CTSDP07339 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CTSDP07339 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.13□□□□□ -0.31
CTSDP07339 AL450487.1-201ENST00000426799 995 ntBASIC13.13□□□□□ -0.31
CTSDP07339 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.13□□□□□ -0.31
CTSDP07339 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CTSDP07339 UNC93B7-201ENST00000509439 705 ntBASIC13.13□□□□□ -0.31
CTSDP07339 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.13□□□□□ -0.31
CTSDP07339 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC13.13□□□□□ -0.31
CTSDP07339 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.13□□□□□ -0.31
CTSDP07339 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CTSDP07339 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.13□□□□□ -0.31
CTSDP07339 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.13□□□□□ -0.31
CTSDP07339 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.13□□□□□ -0.31
CTSDP07339 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.13□□□□□ -0.31
CTSDP07339 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CTSDP07339 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.13□□□□□ -0.31
CTSDP07339 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CTSDP07339 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CTSDP07339 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CTSDP07339 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CTSDP07339 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CTSDP07339 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CTSDP07339 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CTSDP07339 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.13□□□□□ -0.31
CTSDP07339 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CTSDP07339 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CTSDP07339 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.12□□□□□ -0.31
CTSDP07339 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.12□□□□□ -0.31
CTSDP07339 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CTSDP07339 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CTSDP07339 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.12□□□□□ -0.31
CTSDP07339 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.12□□□□□ -0.31
CTSDP07339 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CTSDP07339 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CTSDP07339 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CTSDP07339 AP002414.3-201ENST00000589352 1468 ntBASIC13.12□□□□□ -0.31
CTSDP07339 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CTSDP07339 AC139749.1-202ENST00000617529 3139 ntBASIC13.12□□□□□ -0.31
CTSDP07339 AC067750.1-201ENST00000608826 6545 ntBASIC13.12□□□□□ -0.31
CTSDP07339 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CTSDP07339 WASH3P-207ENST00000560956 1394 ntBASIC13.12□□□□□ -0.31
CTSDP07339 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CTSDP07339 FO538757.1-201ENST00000623083 1397 ntBASIC13.12□□□□□ -0.31
CTSDP07339 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.12□□□□□ -0.31
CTSDP07339 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.12□□□□□ -0.31
CTSDP07339 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CTSDP07339 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CTSDP07339 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CTSDP07339 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
CTSDP07339 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CTSDP07339 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.12□□□□□ -0.31
CTSDP07339 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CTSDP07339 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC13.12□□□□□ -0.31
CTSDP07339 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.12□□□□□ -0.31
CTSDP07339 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.12□□□□□ -0.31
CTSDP07339 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.12□□□□□ -0.31
CTSDP07339 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC13.12□□□□□ -0.31
CTSDP07339 IRF5-214ENST00000613821 595 ntTSL 5 BASIC13.12□□□□□ -0.31
CTSDP07339 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.12□□□□□ -0.31
CTSDP07339 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CTSDP07339 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CTSDP07339 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CTSDP07339 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CTSDP07339 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CTSDP07339 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CTSDP07339 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.12□□□□□ -0.31
CTSDP07339 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CTSDP07339 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CTSDP07339 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CTSDP07339 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.12□□□□□ -0.31
CTSDP07339 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CTSDP07339 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CTSDP07339 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CTSDP07339 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CTSDP07339 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CTSDP07339 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CTSDP07339 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CTSDP07339 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CTSDP07339 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.12□□□□□ -0.31
CTSDP07339 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CTSDP07339 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.12□□□□□ -0.31
CTSDP07339 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CTSDP07339 AC007326.2-201ENST00000624224 7579 ntBASIC13.12□□□□□ -0.31
CTSDP07339 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CTSDP07339 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CTSDP07339 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSDP07339 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSDP07339 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSDP07339 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSDP07339 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSDP07339 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CTSDP07339 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.11□□□□□ -0.31
CTSDP07339 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSDP07339 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.11□□□□□ -0.31
CTSDP07339 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSDP07339 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.11□□□□□ -0.31
CTSDP07339 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSDP07339 AC140479.7-201ENST00000636301 2332 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms