Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CD74P04233 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CD74P04233 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.27□□□□□ -0.28
CD74P04233 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CD74P04233 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
CD74P04233 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
CD74P04233 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
CD74P04233 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CD74P04233 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
CD74P04233 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CD74P04233 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CD74P04233 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.27□□□□□ -0.28
CD74P04233 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.27□□□□□ -0.28
CD74P04233 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD74P04233 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CD74P04233 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CD74P04233 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD74P04233 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.27□□□□□ -0.29
CD74P04233 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13.27□□□□□ -0.29
CD74P04233 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CD74P04233 PRYP6-201ENST00000514804 343 ntBASIC13.27□□□□□ -0.29
CD74P04233 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.27□□□□□ -0.29
CD74P04233 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.27□□□□□ -0.29
CD74P04233 TPM1-218ENST00000559281 851 ntTSL 5 BASIC13.27□□□□□ -0.29
CD74P04233 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.27□□□□□ -0.29
CD74P04233 AL356488.2-201ENST00000602755 427 ntBASIC13.27□□□□□ -0.29
CD74P04233 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CD74P04233 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.27□□□□□ -0.29
CD74P04233 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD74P04233 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CD74P04233 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CD74P04233 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.27□□□□□ -0.29
CD74P04233 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CD74P04233 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD74P04233 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD74P04233 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD74P04233 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CD74P04233 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD74P04233 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD74P04233 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.27□□□□□ -0.29
CD74P04233 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD74P04233 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CD74P04233 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
CD74P04233 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD74P04233 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.27□□□□□ -0.29
CD74P04233 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD74P04233 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD74P04233 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD74P04233 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD74P04233 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CD74P04233 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.26□□□□□ -0.29
CD74P04233 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD74P04233 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD74P04233 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD74P04233 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD74P04233 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD74P04233 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD74P04233 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD74P04233 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.26□□□□□ -0.29
CD74P04233 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD74P04233 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CD74P04233 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD74P04233 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.26□□□□□ -0.29
CD74P04233 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD74P04233 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.26□□□□□ -0.29
CD74P04233 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CD74P04233 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.26□□□□□ -0.29
CD74P04233 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CD74P04233 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.26□□□□□ -0.29
CD74P04233 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CD74P04233 REXO1L2P-201ENST00000425429 2069 ntBASIC13.26□□□□□ -0.29
CD74P04233 PRSS29P-201ENST00000440800 595 ntBASIC13.26□□□□□ -0.29
CD74P04233 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CD74P04233 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CD74P04233 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CD74P04233 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.26□□□□□ -0.29
CD74P04233 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.26□□□□□ -0.29
CD74P04233 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.26□□□□□ -0.29
CD74P04233 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
CD74P04233 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.26□□□□□ -0.29
CD74P04233 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.26□□□□□ -0.29
CD74P04233 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.26□□□□□ -0.29
CD74P04233 AL450472.2-201ENST00000603663 1156 ntBASIC13.26□□□□□ -0.29
CD74P04233 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CD74P04233 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.26□□□□□ -0.29
CD74P04233 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD74P04233 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD74P04233 AC008735.5-201ENST00000623544 497 ntBASIC13.26□□□□□ -0.29
CD74P04233 AC027601.5-201ENST00000624065 2482 ntBASIC13.26□□□□□ -0.29
CD74P04233 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.26□□□□□ -0.29
CD74P04233 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.26□□□□□ -0.29
CD74P04233 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CD74P04233 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CD74P04233 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD74P04233 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD74P04233 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
CD74P04233 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD74P04233 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD74P04233 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CD74P04233 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms